Gene Rcas_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3902 
Symbol 
ID5541408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5106874 
End bp5107197 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content59% 
IMG OID640896013 
Producthypothetical protein 
Protein accessionYP_001433956 
Protein GI156743827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00124689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.162217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA CTATCCACGA ACCGCATTCC CATGTTCACA GTGAACACTG CGGGCACATT 
CGCATCCTCC ATGAGGGGCA TGTGGATTAC CTGCACGACG GGCATCTGCA CCACCCACAC
GAGGGGCACT ACGACGAGCA CGTGATCGCT GTGAGCGCCG ACAATCCCGA TGGATGCGCG
CCAGTAGCGT GCCAATGCGG ACACGACGGG TGTGGCCATC CGCTTGTGCC ACACGGCGAT
CATGTCGATT ACCTGGTCAA CGGACGATTG CACCATCGCC ACGGCGATCA CTGTGATGAT
CACGGTCCCG TAACAGTGCT CTGA
 
Protein sequence
MTHTIHEPHS HVHSEHCGHI RILHEGHVDY LHDGHLHHPH EGHYDEHVIA VSADNPDGCA 
PVACQCGHDG CGHPLVPHGD HVDYLVNGRL HHRHGDHCDD HGPVTVL