| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3887 |
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| Symbol | |
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| ID | 5541393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5087102 |
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| End bp | 5089372 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895998 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433941 |
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| Protein GI | 156743812 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTC AACAGACGCT GCGCAGTGCG CGGTCCGTGA CGACGATTGA TCTCATCTTG
CTGGCTGCTA TTGTTGCGCT GGCGCTGGTC ACACGCCTCT GGTTCTGGCA GGTGCAGGCG
CGTTCCGGCG CCGTGCCGCC GGGCGATCCG GAAGAGTACT ATCGCGCTGC CATCCATATG
CTGCACGGCG GGTACCACGA TACCGGCAAA TGGCTGCGCC CGCCGGTCTA TCCGGCATTC
CTGGCGCTGC TCTTGCCACC GACGAGAATG AATGTCGCCG GAGCGCTGTT GCTTCAGGCG
TGTGTTTTAG GCATCGGAAC GCTGGTATTC TATGCCTCCG GCACGCAACT GTTCGGGCGC
GTCACAGGAA TGGTGACGAC ATTGCTCGCA GCACTGTTCG TGCCGCTGGC ATCGTATGCG
AGTTCGCTTT ATGCCGAAGC GCTGTTTGTG ACACTCCTGG TCATTGGTCT TGCGCTGATC
GACCGCGCGC TGGTTCGCAA CAGCACGCGA GCGGCATGTG GCGCCGGCGT GCTTCTGGCG
CTGGCGGCAC TGACCCGCGC CGTGGGTCTG TACCTGATCC CGCTAGCAGC CGTGTGGATT
GCCTGGCGCA TGCGACACGG CGGTAGCCTG TCGATAGGGA TGGGCTTGTC TGACACGCGC
CTGCGTCGCG TTGCCCGTTC CAAAGATCAC GGCGCCCACA TTCACCCTTC TTCCGATGTA
GGAGAAGGAG CGTGGAAGGA TACAGGGAAA GACGCCTCGC AGAGTGAACA GCACATTATG
AGTGACAAGA GCGACCGCCT GGAGATACGT TCCTATCAAC TGGCAATCTC CCTTATCCTG
GGAGCGCTTC TGGTGGTTGG ACCGTGGGCA GCGCGGAATT ATCTGGCGCA CGGGCGCGTC
ATCCTCAGCG ATACCAATGG CGGCATCAGT ATGTGGTACG GCACAGTGCG CGACGATGCC
GAAGAGAAGG CAGGCGAAGC GCGGCTGGCG GCTGTGCCCA ACCTCGCCGA CCGGCAATCG
CTTGCAATTC AGATGGCGTG GGAGAACATT CGTCATGATC CGGCACGGTT CCTGGCGCGC
ATGCGTTTCA AGATTGCGTC GCTCTACGCG CTGCAAACAC GCAGTTATGC CGTCGGCGAT
GTTATTTCAA TCGACTCGCG TGGTGCGCCA CTGGTTCAGA ATGCAGGCGA ATATCGCCTG
AGCATGACGC TTTTGGCGGA CGTGCAGTAC GTGGCGCTCA TAATCCTGGC AATTGGCGGC
GTCTGTTTTA TGCCGCACCC TGCCCGTGCC ATTCCGACGT TGCTCTGGGT GGGACTGGCG
ACCCTGCTGG CGGTATTGAC CATTGGACAC CCGCGATTGC GCCTTCCGAT TGTTGCGTCT
GTCCTGCCCT TCGCTGCGTA TGCGCTGGTC AGATTGCCCG CAGGATGGCG ACACATCCGT
CAATTGCCGC GCGACCGGCG CAGTTATATG GCGCTGAGCG GAGTGATGGT TTTCCTGGCG
CTGATCGTCA GCATGCGGTA TATTCCGTGG GGTGCGGGTA TGTGGTATGC TGTGCCGGGA
CGATCGGCAC TCGAAGCGGG CGATTTGCGA CAGGCTGAAA CGCTGCTGGC GCTGGCGCAC
GATGCTCACC CGGATAACCC GTTGCGCGTG ATCGATCTTG CCGATCTGCG GTTGGCGCAG
GGCGATGATC GGGCGGCGCT TAGCCTGTAC CGGCGCGCGG CTGAGATGGA ACGTCGCAGC
CTGTATGCGC AGGCGATGCG CGCCATCACC GGCGCGTATC TTGCCATGCC CGACGAAGCG
GCAGCAGGAT TGGCAGCGAT CGATGATTAC TGGCGCTCAG GCAACGATCT GCTCGAATGG
GCATGGACCA CACGGCGACG TCCTGCACCG GATCGCGTCG TTCCCGGCGA TCCGATGGCG
CTGGGACTGT ATGCCGGGTT TGCGCCCGCC ACGCCTGATC TCGCGGTTGG GCGCTGGACC
CTGGGAGAAG GACGGGTGCG GGTGCGTGGC GGCTGCGGCG CCTTAGCGGT TCAGTTGCGC
GGACCATCCG GGCGTCGGGT AGACATCAGC ATCGACGACT GGGGTATTCG AAAGCGGATG
ATAATGAACG GCGAACAACA GGAGGTGCGC CTTGCGCTCT CCGGCATTCG CGAATGTGAA
TTCGGACCCG AACTGACTGT GCATATCGTC AGCGAAACGG GACTGCTCGA TCTGGAGCGG
GCGCCATGGT ACACGGGCGT GGCAGTGTAC GAGGTGCGTG TCGAACGGTG A
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| Protein sequence | MQAQQTLRSA RSVTTIDLIL LAAIVALALV TRLWFWQVQA RSGAVPPGDP EEYYRAAIHM
LHGGYHDTGK WLRPPVYPAF LALLLPPTRM NVAGALLLQA CVLGIGTLVF YASGTQLFGR
VTGMVTTLLA ALFVPLASYA SSLYAEALFV TLLVIGLALI DRALVRNSTR AACGAGVLLA
LAALTRAVGL YLIPLAAVWI AWRMRHGGSL SIGMGLSDTR LRRVARSKDH GAHIHPSSDV
GEGAWKDTGK DASQSEQHIM SDKSDRLEIR SYQLAISLIL GALLVVGPWA ARNYLAHGRV
ILSDTNGGIS MWYGTVRDDA EEKAGEARLA AVPNLADRQS LAIQMAWENI RHDPARFLAR
MRFKIASLYA LQTRSYAVGD VISIDSRGAP LVQNAGEYRL SMTLLADVQY VALIILAIGG
VCFMPHPARA IPTLLWVGLA TLLAVLTIGH PRLRLPIVAS VLPFAAYALV RLPAGWRHIR
QLPRDRRSYM ALSGVMVFLA LIVSMRYIPW GAGMWYAVPG RSALEAGDLR QAETLLALAH
DAHPDNPLRV IDLADLRLAQ GDDRAALSLY RRAAEMERRS LYAQAMRAIT GAYLAMPDEA
AAGLAAIDDY WRSGNDLLEW AWTTRRRPAP DRVVPGDPMA LGLYAGFAPA TPDLAVGRWT
LGEGRVRVRG GCGALAVQLR GPSGRRVDIS IDDWGIRKRM IMNGEQQEVR LALSGIRECE
FGPELTVHIV SETGLLDLER APWYTGVAVY EVRVER
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