Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3877 |
Symbol | |
ID | 5541382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5069015 |
End bp | 5069368 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895987 |
Product | hypothetical protein |
Protein accession | YP_001433931 |
Protein GI | 156743802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00430836 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.195451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCG TGTTCCGTGT CTTGTTCTTC AGTCTGCTCC TCACCTGCCC GGCATGCCAG CGCGGGCGCA TGTTTCGTTC GCGTTTCACC ATGAATGTGC GCTGCCCGGT GTGCGGTATC GTCTTTGAGC GTGGTGCGGG TGAATTCAGC GGCGGGATGG CGATCAATAC GGTCGCCACC TCATCGGTGG CGGTCAGCGG CGCGGCGCTC GCGTTTTTTA CCGATATGCC GGTCTGGACC CTGATCGTGG CATTGACGCT TGTTTCGGTC CTCTTCGCCC TCTGGTTCTA CCGCTACGCG CGCGCTCTGT GGGCGGGCAT TCTGTATTTG ACCGGCTCGA TACGGGAAGA TTGA
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Protein sequence | MQRVFRVLFF SLLLTCPACQ RGRMFRSRFT MNVRCPVCGI VFERGAGEFS GGMAINTVAT SSVAVSGAAL AFFTDMPVWT LIVALTLVSV LFALWFYRYA RALWAGILYL TGSIRED
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