Gene Rcas_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3877 
Symbol 
ID5541382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5069015 
End bp5069368 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID640895987 
Producthypothetical protein 
Protein accessionYP_001433931 
Protein GI156743802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00430836 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.195451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCG TGTTCCGTGT CTTGTTCTTC AGTCTGCTCC TCACCTGCCC GGCATGCCAG 
CGCGGGCGCA TGTTTCGTTC GCGTTTCACC ATGAATGTGC GCTGCCCGGT GTGCGGTATC
GTCTTTGAGC GTGGTGCGGG TGAATTCAGC GGCGGGATGG CGATCAATAC GGTCGCCACC
TCATCGGTGG CGGTCAGCGG CGCGGCGCTC GCGTTTTTTA CCGATATGCC GGTCTGGACC
CTGATCGTGG CATTGACGCT TGTTTCGGTC CTCTTCGCCC TCTGGTTCTA CCGCTACGCG
CGCGCTCTGT GGGCGGGCAT TCTGTATTTG ACCGGCTCGA TACGGGAAGA TTGA
 
Protein sequence
MQRVFRVLFF SLLLTCPACQ RGRMFRSRFT MNVRCPVCGI VFERGAGEFS GGMAINTVAT 
SSVAVSGAAL AFFTDMPVWT LIVALTLVSV LFALWFYRYA RALWAGILYL TGSIRED