| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3853 |
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| Symbol | |
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| ID | 5541357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5036152 |
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| End bp | 5037531 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895963 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433908 |
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| Protein GI | 156743779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.676835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA CACAGATCCA CGGTTTCACC CATTGCGCAG TTGGCATCGC GCGCCGAGAC
GTGACTCCGC CTGTCGGAAT CTACGCGCGA TCATGGGGCG CAGCGCGCCG CGATGTCGCT
GAAGGAGTGC ATCGGCCACT GACGGCAACA ACGCTGGTGA TGCGCTCGCT GGACGCGGAC
GAGCCGACGC TGGCGCTCGT GGCGCTCGAT GTTGGCTGGT TTCCGTACCT TCCCGATGAA
CGCCAGATGC GCAGCGCCGT CCTGAACGCA ACCGGGCTGG ATGAAGATGC GTTGCTGATC
AATTTCTCAC ACACCCACGC CGGTCCGTAC CTCAACAGTC AGATCACCGA TAAACCCGGC
GCACACTTTA TCGAACCATA CCTCAGCGAT CTGACCGGTG CGCTTGTCGA GGCGATTATT
GAAGCCAGAA ACGCCATGCG CCCGGCGTGG ATCACCTATG GGTACGGGCG CTGTGCGCTG
GCAGCAAATC GCGATTTCTG GGCGCCGGAT GTCGGGAGGT ATGCCTGCGG CTACAATCCT
GCGACGCCTG CCGATGATAC GGTGCTCGTC GCCCGTGTTA CCGGAGAGGA TGGCGCGATC
ATAGCCATAC TGGTCAACTA TGCCTGCCAC CCGACAACCC TTGCCTGGCA AAATCGCTTG
CTCTCACCCG ATTATGTCGG CGCTATGCGC GACACACTCG AGTCGATCTA CGGAGCGCCC
TGCCTGTTCC TCTATGGCGC TGCTGGCGAT CTCGGTCCGC GCGAGGGGTT CGTTGGCGAT
CCGGCAGTCG CCGACCGGAA CGGACGGCAA CTGGCATACG CGGCTGCGGC GGCGATTGAG
GCGTTGCCGC CGCCAGCGTC GCGCTTTGTG TATACCGGGG TGGTCGCTTC CGGCGCCAAC
CTGGCCACCT GGGAGTACCG TCCACTCGAT CCTGCCGACC GGGCGCGCTG TGCGACGCTG
CGACAGCAGT GTGCGATCGT GCCGCTGCAA CGCAAGCCGA TGCTGGAACC GATCGATCCG
CCGGGCGCCA ATCGCGGCGA CTCGATTGCA GAAGCCGAGA AAGCGTCGCG GCGGAAGTGG
CTCCAGGCGG CGCTCGGCGA TGAACCGGTC TATCCGATGA CCCTCTGGTT CTGGCGGTTG
GGTGATGCGC TGCTTGTCGC CTGCCCAAAT GAAGCCTACG CTCAGATGCA GATCGAACTC
CGTGCCCGGT TTCACCACCA ACCGGTGCTG GTCCTGGGAT GCACCAATGG CACGCTCGGC
TACCTGCCCC CCCGCGATGC ATACGGCAGC GGTCTCTATC AGGAACAACA ATCTCCTTTT
CTCCCCGGTT GTCTGGAACA AACAATTGCA GCCGCCATCA GCGGATTGGA GCGTCTATGA
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| Protein sequence | MDLTQIHGFT HCAVGIARRD VTPPVGIYAR SWGAARRDVA EGVHRPLTAT TLVMRSLDAD
EPTLALVALD VGWFPYLPDE RQMRSAVLNA TGLDEDALLI NFSHTHAGPY LNSQITDKPG
AHFIEPYLSD LTGALVEAII EARNAMRPAW ITYGYGRCAL AANRDFWAPD VGRYACGYNP
ATPADDTVLV ARVTGEDGAI IAILVNYACH PTTLAWQNRL LSPDYVGAMR DTLESIYGAP
CLFLYGAAGD LGPREGFVGD PAVADRNGRQ LAYAAAAAIE ALPPPASRFV YTGVVASGAN
LATWEYRPLD PADRARCATL RQQCAIVPLQ RKPMLEPIDP PGANRGDSIA EAEKASRRKW
LQAALGDEPV YPMTLWFWRL GDALLVACPN EAYAQMQIEL RARFHHQPVL VLGCTNGTLG
YLPPRDAYGS GLYQEQQSPF LPGCLEQTIA AAISGLERL
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