| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3852 |
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| Symbol | |
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| ID | 5541356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5035015 |
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| End bp | 5035989 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895962 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001433907 |
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| Protein GI | 156743778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.62358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.635405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA CTGGTGTTAT GACCGATCCT GTCCCGCACG ATAGAAACGC ACAACGTGCT
TTGCGAGCGC ATGAGATTGT GCACATTCTG GAGCAACAGA TCCGCTCCGG CGCGTACCGA
TCCGGCATGC GCTTGCCGAC TGTCCGTGAA CTTGCTGAAC AGTATCACGT CAACAAGAAT
ACTGCCGCGC GCGCATACCA GATATTGGAG CAGCGCGGGT TGATTGACGT GTCACGCGGT
CGTGGCGCAT TTGTGTGCGC AATAATGGAG TATGACCGGT CAACATTGCA GCAGCAGGTC
GAACGCTTTG TTCAGACAGC CCGGCATTCA GGGTTGAGTC GTAGTCAGTT GATGGACCTG
ATCCACAACG CGGTGCATCA GTCGTATGGG TCTGATGCGC CGCGCGTGTT GTTTGTCGAA
TGCAACCGGC GTGATGTCGA AACGCTCGGC GACGAGATTG AAAGCATTGC TGACGTGCCA
ATGGATCGGG CGCTGCTCGA TGATGTCCTG CGCGATCCGG TCACACCCGT TCACCGCTAC
GATCTGATCG TCACCACCTT TCAGCACCTG GGGCAGATTC GCCAGGCTGT GCCATCCTCT
GCACGCCAAC GGGTCATTGG CGTGCTGGCG ACGCCATCAC ACGAGTCGTT GCTGGCGCTG
GCGCGTCTGC ACGTTCCAAC TTTTGGTCTG GTGTGCGACT CGCCGGGAAC GGTCGAAAGT
CTGACCCATA TCATTCGCAC CTATCATCCG AACTCAGCGG TCATTCCTGT TCTGATCGAT
AACCGCACGC GCCTGCACGA CATGATCGAG CAGGCGGACG CCATCGTGGT CACCCGATCC
TGTCGGGAAC GTCTGCTGGC GTTGAATCCC GCGCTGCCCA TTATCACCGT GGTCTTCACG
ATCGATCAGC AGTCGATTGA TTTCTTGCGC CGCCGTCTTG AGGAAACTGC GCAGATGAAC
GCCATGCAGG GATAA
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| Protein sequence | MKDTGVMTDP VPHDRNAQRA LRAHEIVHIL EQQIRSGAYR SGMRLPTVRE LAEQYHVNKN
TAARAYQILE QRGLIDVSRG RGAFVCAIME YDRSTLQQQV ERFVQTARHS GLSRSQLMDL
IHNAVHQSYG SDAPRVLFVE CNRRDVETLG DEIESIADVP MDRALLDDVL RDPVTPVHRY
DLIVTTFQHL GQIRQAVPSS ARQRVIGVLA TPSHESLLAL ARLHVPTFGL VCDSPGTVES
LTHIIRTYHP NSAVIPVLID NRTRLHDMIE QADAIVVTRS CRERLLALNP ALPIITVVFT
IDQQSIDFLR RRLEETAQMN AMQG
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