| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3848 |
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| Symbol | |
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| ID | 5541352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5029785 |
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| End bp | 5030951 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895958 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001433903 |
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| Protein GI | 156743774 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.161688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCCGCGTTTC GACCCTCGTT GTGCACGCAC GGATGCGCAA CTGGGTTTTC
GTCAAAGTCG AAACCGATCA GGATGGACTC TATGGCTGGG GCGAGGCGAC ACTCGAATGG
AAGACCAAAG GCGTGGTCGG CGCCGTTGAG GATGTCAGTC GCCTGATCAT CGGTGAAGAC
CCCCGGCGCA TCGAACACCT GTATCAGATG ATGACCCGTC AGTACTTCTG GCGCGCCGGC
ATCGAGGGGA TGACCGCCAT GAGCGGCATC GAGCAGGCGC TCTGGGATAT CAAAGGCAAG
TGGTTGAACG TGCCGGTCTA CGAGTTACTC GGCGGGCGCG TTCGAGACCG GATACGGGTC
TATAACCATC TTGGCGGCGG TACGATGGAG CACATGTACG AAACGACCGA CCCCGACTTG
TTTGCCGAGC GCGCGTTGAT GGTCAAAGAG CAAGGGTATA CAGCGCTCAA GTTTATGGCA
GTGCCGCGGA CGGAACCTGT TGAGGGCATG CGTCCGGTGC GGTATGCCGA GCGTCTGGTG
CGCGCCGTGC GCGACGCGGT CGGCGATGAT GTCGATCTGA TGGTCGATCT CCACGCCCGG
TGCGCTTCTC CGGCGATGGC GCTGCGCTAC TGCCGCGCGT TCGAGCCGTA TGGGTTGCTC
TTCTTCGAAG AGCCTTGCCC CAGCGAGGAT ATCGAAGCCA CCGCTCAGGT CACCCGCGCC
TCGAACATTC CGATCGCTAC CGGCGAACGC CTGGTCGGGC GACATCAATT CCGCGAAGTG
TTCGAGCGGC GCGCCTGCCA TATCATTCAG CCCGATCTGT CGCACTGCGG CGGTCTGTGG
GAAGCGCGCA AGATCGCGGC AATCGCCGAA ACGTACTCGA TGGCCGTTGC GCCGCATAAC
CCGAATGGAC CGATTGCGAC GGCGGCTGCC ATTCATTTCG CCGCCGCCAC GCCAAACTGG
GTGATTCAGG AAGCGATCAG CAACGATGTC CCCTGGCGAT ACGATGTGGT CGACTCAGAG
CATCAGGTTC GGGATGGGTA TATTGCCATA CCCTCACGCC CCGGTTTGGG CGTCGAGGTG
AACGAGGGCG AGGCGGCGCG CCACCCCTGG CAGCCGGAAC TGGTGCAACG CTATTTCCAT
CCCGACGGTT CCGTGGCTGA TTGGTAG
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| Protein sequence | MKITRVSTLV VHARMRNWVF VKVETDQDGL YGWGEATLEW KTKGVVGAVE DVSRLIIGED
PRRIEHLYQM MTRQYFWRAG IEGMTAMSGI EQALWDIKGK WLNVPVYELL GGRVRDRIRV
YNHLGGGTME HMYETTDPDL FAERALMVKE QGYTALKFMA VPRTEPVEGM RPVRYAERLV
RAVRDAVGDD VDLMVDLHAR CASPAMALRY CRAFEPYGLL FFEEPCPSED IEATAQVTRA
SNIPIATGER LVGRHQFREV FERRACHIIQ PDLSHCGGLW EARKIAAIAE TYSMAVAPHN
PNGPIATAAA IHFAAATPNW VIQEAISNDV PWRYDVVDSE HQVRDGYIAI PSRPGLGVEV
NEGEAARHPW QPELVQRYFH PDGSVADW
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