Gene Rcas_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3822 
Symbol 
ID5541325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4996500 
End bp4996976 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640895932 
Producthypothetical protein 
Protein accessionYP_001433878 
Protein GI156743749 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCC TGATGGTCTA CGCATCCTGG TTTGGTCACA ACCGCGAAGT CGCCCGAATC 
ATCGCCGACC GGTTGTCGCC GTATGCCTCC CATGTCATCT GCGCACCGGT AACTTCTGTA
ACTGCCAGCG ATACGATAGG GTGCGACATG CTGGTGCTGG GAAGCTTCAC CCATGCCCAT
CACGCCAGCT GGCGCATGCG GCATCTGGTC GCAACCATTC CAGAGCGCCG CCTCAAACGT
ATGGCTATAG CGGTCTTTGG CACACAAACG GTCGATGAAC GACCGAGCGG CATCGACGAC
CTGGTCAACG CACTGGCAGA GCGCGGCGCG CGGCTGGTTG TTCCCCCGCT CAGGGTCATC
CTGCCAGCGC CGGATTTCGT ACCATGGTCG AAGATCACGT CTGCGGAACG CGCTAAAATT
GATGCGTTCG TACAGGCGCT GGTACATCAA CTGGAAACGG AATTGATTGG TCGATAA
 
Protein sequence
MRVLMVYASW FGHNREVARI IADRLSPYAS HVICAPVTSV TASDTIGCDM LVLGSFTHAH 
HASWRMRHLV ATIPERRLKR MAIAVFGTQT VDERPSGIDD LVNALAERGA RLVVPPLRVI
LPAPDFVPWS KITSAERAKI DAFVQALVHQ LETELIGR