Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3809 |
Symbol | |
ID | 5541311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4979268 |
End bp | 4980485 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895919 |
Product | hypothetical protein |
Protein accession | YP_001433866 |
Protein GI | 156743737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATC TATCGCTTCG CCCACAACCA CTCGGTATCT TTCCCGCACC GACGGGGTAC CTGGTGATTC CGCCGGTTGC CGGCGCCGAA GAGGTCTGCG CTGCGCTGCT TGCAGGGCAC ACGCCGGAAC ATATGCCCGA TGCGCTTCGC TTTTACACGC TGGCGCTGGT GGATGATCGT GAAAGCGCCT GGCGCGCGTT GGCGTATGAT TCCTCACCGG AAGCGCACTA CAATCGTTTT GTGCTGCACA GTGACCCGGA TATCTATCCA TATTTGCGTA AGCAGTTACG CGGCGATCTG GCTGCCCTGC TCGACTTCGT GGCGTATATG GTCGGCTTAA GAGATGCGCC GCCTGATGCA GACGCAGTAT GTGGCGAAAT TGCCGCGTGC ATCCTGCCGG CGCATGCTGC GGATGCGCTT GCCCGCCAGC AGTACGATGC CGCTATCGCC GCGCTCCAAC GCGCAGTCGA AGAAGTTCGG CACATTTCGC CATTGTTTGC TGCGCAGCTG CTGGATCGTC TGGCGACGAT CCACGCCGGT ATCAGCCAAT CGGCGGCGGC GCTTCAGGCA TTGCGCGATG CCGTGAAACT GGCCGGCGGG GGGCGTCGCC TCGACCTGCG CGCGTATCTG GCGTTGCGGT TGGGGATGTT GTGCCAGGAT CTCGCTCATG GGCAGAGGAA CCTGCTGATT GAGGCGAACA CATGGTTCGA GGAGGCGTTG CGTTGCTGCT CGATTGAGAG CGACCCCGAC CTCTACGCGC TGGCGCATTA CCGGCTGGCG CTGACGATCC TGGCGCTTGC GCCTGCGGGC AATGGCGATC AGATATTGCG CGAACGAGCC ATTCAGTCGT TGCGGGAGTC GCTCCGGGTC TACACCTGCG ATACGCACTA CGAGCAGTGG CTCAATGCAC AGGTTACGCT TGCCAATGCC TTGCGGATTT CGTTTGTTGC ATCCCCTGCC AATCATCTGA TCGAAGCGGT GCGCCTGTAC GACGAGGCGC TGGCAAGCCG CGATCAGGAG TGTGATCCGA TCTGGTACGG ACGTCTGCTG GCGAACCAGG GGAATGCGCT GTTCCATCTT GGCGATTTTG CCCGCGCCCG TGACCGTTTG ATCCGCGCCC GCGCGATCTT CCTTGCTCAC CGTGACTATG GCGCTGCGGC GTTGCTCGAC GAGGCGCTGG TCGAAATTGA GTGCCGGGGG TTAGGGGTAC GGGGCTAG
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Protein sequence | MAHLSLRPQP LGIFPAPTGY LVIPPVAGAE EVCAALLAGH TPEHMPDALR FYTLALVDDR ESAWRALAYD SSPEAHYNRF VLHSDPDIYP YLRKQLRGDL AALLDFVAYM VGLRDAPPDA DAVCGEIAAC ILPAHAADAL ARQQYDAAIA ALQRAVEEVR HISPLFAAQL LDRLATIHAG ISQSAAALQA LRDAVKLAGG GRRLDLRAYL ALRLGMLCQD LAHGQRNLLI EANTWFEEAL RCCSIESDPD LYALAHYRLA LTILALAPAG NGDQILRERA IQSLRESLRV YTCDTHYEQW LNAQVTLANA LRISFVASPA NHLIEAVRLY DEALASRDQE CDPIWYGRLL ANQGNALFHL GDFARARDRL IRARAIFLAH RDYGAAALLD EALVEIECRG LGVRG
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