| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3807 |
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| Symbol | |
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| ID | 5541309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4977059 |
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| End bp | 4977754 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895917 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001433864 |
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| Protein GI | 156743735 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.907816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC CTCGACTTCT TGAGATTCGC CAGGGTGTGC TCAGCAAGAA TGACCGTCTG
GCGGCTGAGT TGCGCAGCCG CTTCCATGCC GCTGGTGTCT TTGTCGTCAA TCTGCTCTCC
AGCCCCGGCG CCGGCAAGAC CCGGTTGCTC GAGGAGACCA TGCGCCGGAT GCGGCAGCGC
AACCTGCGTG TGGCGGCGCT GGTCGGCGAC CTGGCGACCG ACAACGACGC GCAACGACTC
GCGCGGAGCG GCGCGCCGGT GCGTCAGATT CAGACCGGGG ATATGTGTCA CCTGGAAGCG
CACCTGATTG AGCGCTATCT GGAAGGTTGG GATTTGAACG ACTTCGATGT GCTGTTTATC
GAAAATGTCG GCAACCTCGT CTGTCCAACA GGGTACGATC TGGGTGAGGC GGCGCGCGCA
GTGCTGCTCT CGGTGACCGA GGGTGAGGAT AAGCCGTTGA AATATCCTGG CGCATTTGTG
TCGGCAGATT GTGTTGTGGT GACCAAGGTC GATCTGGCGG AGGCGGTCGA GTTCGACATG
CGCGCAGCCG AAGCGAACAT CGCCTCAGTC CATCCCGGTG TGCCCATCGT GTACACCTCG
GCGCGCACCG GCGCCGGGTT GGACGATTGG ATCGTCTGGC TCGACGCACG GCGACATGCG
ATGGCGGCAG TGGTGGATGC CTCTTCTCCC GGCTAA
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| Protein sequence | MATPRLLEIR QGVLSKNDRL AAELRSRFHA AGVFVVNLLS SPGAGKTRLL EETMRRMRQR
NLRVAALVGD LATDNDAQRL ARSGAPVRQI QTGDMCHLEA HLIERYLEGW DLNDFDVLFI
ENVGNLVCPT GYDLGEAARA VLLSVTEGED KPLKYPGAFV SADCVVVTKV DLAEAVEFDM
RAAEANIASV HPGVPIVYTS ARTGAGLDDW IVWLDARRHA MAAVVDASSP G
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