| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3805 |
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| Symbol | |
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| ID | 5541307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4974405 |
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| End bp | 4976027 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895915 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001433862 |
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| Protein GI | 156743733 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.793332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA CTGTGAACAC AAAACGCATG GATCTCCACG TAAGTCCGCT GGGGCGCGTG
GAAGGCGACC TGGATCTGCG CGTCACCGTG GAGGATGGGG TCGTGACGCA GGCATGGACG
GAAGCCGGCA TGTTTCGCGG CTTTGAGATG ATTCTGAAAG GAAAAGACCC GCAGGCAGGG
TTGATCGTGA CGCCGCGCAT CTGTGGCATC TGTGGCGGCA GCCATCTGTA CAAATCCGCC
TTTGCTCTGG ATGTCGCCTG GCGCACAGAA CTGCCGCCAA ATGCGCTGCT GGTGCGCAAC
ATTGCGCAGG CGTGCGAAAC GTTGCAGAGC GTGCCGCGCT GGTTCTACGC GCTCTTCGCT
ATCGATCTGA CGAATCGGCG TTATGCAAAG GCGAAGGGGT ACGATGAAGC CGTGCGCCGC
TTTGCGCCGC TGGTCGGTGA GTCGTATGAG CGCGGTGTGA CCCTCTCGGC GAAGCCGGTC
GAGATCTACG CCATTTTCGG CGGGCAGTGG CCTCACTCCA GTTTCATGAT TCCCGGCGGG
GTGATGTGCG GTCCGACCCT CTCCGACGTT ACCCGTTCAA TCGCTATTCT TGAGGAGTTC
CGCCATAACT GGCTCGAATC GCGCTTCCTG GGGTGTTCCG TTGATCGCTG GCTGGAGATC
AAGACGTGGG AAGATGTGCT GGCGTGGGTC GATGAGAATG AGTCGCAGCA CAATTCCGAC
CTGGGTTTCT TCCTGCGGTT TGGGTTGGAG ATCGGGTTGG ACCGGTTCGG CGCCGGGTGT
GGCAACTATC TGGCGATGGG CACCTACCTG CACCACGAGA AGTACAACCG TCCCACCATC
GAAGGGCGCA ATGCGGCGCT CATCCAGCGT TCCGGCATCT ATGCCGGCGG GAAGCACTAC
GAGTTCGATC AGGCGCGGGT GCGCGAGGAT CATACTTTCT CGTTCTACCA GGGCAGCGGC
TTGCTCCATC CCTTTGAGGG ACGAACTGAA CCCATTGATC CGGCGGACGC CAAGCGTCAG
GGCAAATACA CCTGGGCGAA GGCGCCGCGG TATGATGTGG ACGGTCTCGG CTCTGTGCCG
CTCGAAGTTG GTCCGCTGGC GCGTCAGGTT GTCGCAGGAA AACCAGGCGA AGAGTGGCAG
GATGTCGATC CGCTCTTCTC CGATATTATC GCCAAAAAAG GACCAAGCGT GCTGGTGCGC
GTCCTGGCGC GGCTGCACGA GGAAGCCAAA CTGTACAAGA ACGTTCGTGA ATGGCTCGGC
GAACTCGATC TCCATGATCG CTTCTATATC AAGCCGGTCG AGCACGAGTT CGGCAGAGGC
TTCGGTGCCA CCGAGGCGGC CCGTGGGGCG CTTGCCGACT GGATCGTGCT GGAGAACGGC
AAAATCGCCA ATTATCAGGT GGTGACGCCA ACTGCCTGGA ATATCGGCCC GCGCGACAGC
CGGAATGTCA ATGGTCCAAT GGAGCAGGCA TACCTTGGCA CGACCATTCA CGATCCCGGT
GATCCGGTGG AACTGGGGCA CGTGGCGCGC AGTTTCGACT CTTGCCTGGT CTGCACCGTT
CACGCCTACG ACTCGAAGAC CGGCAAGGAG ATCGGTGTCT ATCGGATTGG TGAGACGGGG
TAG
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| Protein sequence | MTATVNTKRM DLHVSPLGRV EGDLDLRVTV EDGVVTQAWT EAGMFRGFEM ILKGKDPQAG
LIVTPRICGI CGGSHLYKSA FALDVAWRTE LPPNALLVRN IAQACETLQS VPRWFYALFA
IDLTNRRYAK AKGYDEAVRR FAPLVGESYE RGVTLSAKPV EIYAIFGGQW PHSSFMIPGG
VMCGPTLSDV TRSIAILEEF RHNWLESRFL GCSVDRWLEI KTWEDVLAWV DENESQHNSD
LGFFLRFGLE IGLDRFGAGC GNYLAMGTYL HHEKYNRPTI EGRNAALIQR SGIYAGGKHY
EFDQARVRED HTFSFYQGSG LLHPFEGRTE PIDPADAKRQ GKYTWAKAPR YDVDGLGSVP
LEVGPLARQV VAGKPGEEWQ DVDPLFSDII AKKGPSVLVR VLARLHEEAK LYKNVREWLG
ELDLHDRFYI KPVEHEFGRG FGATEAARGA LADWIVLENG KIANYQVVTP TAWNIGPRDS
RNVNGPMEQA YLGTTIHDPG DPVELGHVAR SFDSCLVCTV HAYDSKTGKE IGVYRIGETG
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