| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3749 |
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| Symbol | |
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| ID | 5541251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4918126 |
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| End bp | 4918971 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895860 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001433807 |
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| Protein GI | 156743678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.074776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000110577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATCA ATAATGTTCC GATTGTGTTC CCCACGACAG CAATCGACAA GGGTTTTGCG
TTGCTGCCAA ACGTTGCTTC ATTTGCTTCG TCCATCGGAA GGCCCCTGCG CATCATCCAC
GTCCTCAGTC AACGCTACCG CAGTTATGCC GAACGGCAAA TGGCGTCGGC GCTGGAAGCG
CTTCCTTCCG GCAACGGTCT GGTCTACGAA CTGCTCAAAA TCGAAAAGAA GCAACGTCGC
GCTATCCTCG ACGAAATCGC AACCACGACC GGCGGCATTC TGGCGATGTT GCCCACGCGC
CACAACTTCA TCAACCGATT GCTGGCGATG ATGAGCGACT ATGAAAAGTT CATGATCGAG
GGTCCGCTGC CGCTGCTAGC GCTCCCGCGC AACGGTGCGC TTCCGACTTC GATTGGGCGC
ATTCTCTTCC CGCTCGACCT TTCCCCGCGT TCTGATGATT CGCTTGAACA GGCCGCCGAT
TTTGCAAAGT CGGTTGGCGC TGAACTGCAC CTGCTCCACG TCTTCGGCGA CGACCGGTTG
CTCCCATCCG AAATGGATAT GAAAGCACGC ATGGCTGCGC GCTCACCGCG TGAACTGTAT
CAGATCGACA AAGACCACAT TCAGGATCTT GCAGAACGCG CCCGCACCCA CGATGTCAAC
GTCATTGCCG CCACTGCCGA AGGTCGCGCG CATGCCGCCA TTCTGAACTA CTGCAACGCC
GAGAAGATCG ATCTTGTCAT TATGGCGACT CATGGTCCGC GCACCAGCGA AGATATCTGG
AAGGGCACCA CCACGGCACG AGTCATTCAG CACGCCAACA TCCCGGTCAT TGCGATACGC
TGTTGA
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| Protein sequence | MRINNVPIVF PTTAIDKGFA LLPNVASFAS SIGRPLRIIH VLSQRYRSYA ERQMASALEA
LPSGNGLVYE LLKIEKKQRR AILDEIATTT GGILAMLPTR HNFINRLLAM MSDYEKFMIE
GPLPLLALPR NGALPTSIGR ILFPLDLSPR SDDSLEQAAD FAKSVGAELH LLHVFGDDRL
LPSEMDMKAR MAARSPRELY QIDKDHIQDL AERARTHDVN VIAATAEGRA HAAILNYCNA
EKIDLVIMAT HGPRTSEDIW KGTTTARVIQ HANIPVIAIR C
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