| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3747 |
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| Symbol | |
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| ID | 5541249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4916366 |
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| End bp | 4917337 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895858 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001433805 |
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| Protein GI | 156743676 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00165792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000793402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGACGA CACGCGCCAT CGTCATCACG GCGCCACAGC ATCTGGAGTT GCGCAACGTG
GCGCTGACAG ACGCAGGACC TGAGGAGGTC GTGGTGCAAA CCGCGTTTAC CTCGGTCAGC
GCCGGAACAG AGCGCATGTT GCTGGCGGGA CGAATGCCAC ACCCAATGTT GCAGTTTCCG
GTGGTGCCGG GGTACGAAAC GGTCGGTCGG GTCGTTGGAC GGGGCGCAGC GGTTCCGGCA
GAATACGAGG GGCGCTGGGT GTATGTCGGC GGGGCGCGCT GCTTCCGTGA TGTCAACCCG
GCGTGGGGTG GCCAATCGGC GATCCTGCTG GTCGATTACC GCCGGGTGGT TCCGCTCGAT
GGCGTCTCGC CGGATCACGG CGTGCTATTG GCGCTGGCGG CAACTGCGCT GCACGGCGTC
GATCTGATTG CCGGCGCCAA CCATGATCTG ACCGGTCGAC GGATACTGGT GCTGGGGCAG
GGTCCGGTGG GACAGTTTGC GGCGCGGATT GCGCGGGCAC GTGGCGCATG GGTGGCTGTC
GGCGACCGGA TTGCCAGTCG CCTTGAACGG AGTGTAGCGG ACCTGCGCAT TGACGTTACG
ACCGACTCGC TCGTAGCGGC AGTGCCGCAA CCGGTCGATA CAATTATCGA GGCAACCGGA
TCGATGGCAG CGTTGAACGA TGCGCTGCCA CTTCTTGCGA ACGATGGCAC ACTGCTGTTA
CTCGGATACT ACGACGAACT GCGCCTGCCG TATATGCCGT TGTTCCTCAA ACAGGCGCGA
TTGCTGACTG CGAAGGAATG GGCGGCGGGC GATCTCCAAC GGAGCCGTGA TCTGCTGGCG
AGCGGTATGC TCGACGCTGC GGCGCTGATC ACGCATCGCA TGCCGGTAGC GCAGTTCGAG
GCAGCGTATG CCACAGCGCT GAACGACCCG GAGTGCTTGA AACTGGTGAT CGAGTGGGAT
GTTTCAGGCT GA
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| Protein sequence | METTRAIVIT APQHLELRNV ALTDAGPEEV VVQTAFTSVS AGTERMLLAG RMPHPMLQFP
VVPGYETVGR VVGRGAAVPA EYEGRWVYVG GARCFRDVNP AWGGQSAILL VDYRRVVPLD
GVSPDHGVLL ALAATALHGV DLIAGANHDL TGRRILVLGQ GPVGQFAARI ARARGAWVAV
GDRIASRLER SVADLRIDVT TDSLVAAVPQ PVDTIIEATG SMAALNDALP LLANDGTLLL
LGYYDELRLP YMPLFLKQAR LLTAKEWAAG DLQRSRDLLA SGMLDAAALI THRMPVAQFE
AAYATALNDP ECLKLVIEWD VSG
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