Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3718 |
Symbol | |
ID | 5541220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4876908 |
End bp | 4877417 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895829 |
Product | hypothetical protein |
Protein accession | YP_001433776 |
Protein GI | 156743647 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00431162 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGATATTC GTGGAATTAT TGCCAATGTT GCGCCGCTCG TGTCGGTGCT GGCGTGGATA TTGCTGGCGT ACCTGATCCT GCTCTGGGCA GCATCGGTGT TGTGGACGTA CCGCGATATT CATAGCCGAA GCGAGGATGT GGCGGTGCAG GTGCTGGCGG TGACGCTGGC TCTGGTGCTG CCGTTTGGTG GCGTCTTACT GCACTTGATC TTGCGCCCAC GCCAGACGCT GACACAAAAA TATGAACGGA TGCTCGAAGA AGAGTATCTG CGCCGCAATC TCGAAGACCC CCACGTCTGC CCGACATGCC AGCGACCTGT CGAACCGGAT TTTATTCTCT GCCCCCATTG CCAGACGGCG CTGCGTCGCC GTTGCGGCTC GTGTGGTCGC GTCATCGACC TTGCCTGGAG CATCTGTCCC TATTGTGGCG ATGATGGCAC GGGTGTGTTG CAACGCCCCA GTTATCGCCA GCGTGTCGAA ACCGAGCATG CGCAACTGTA TGAACGATAA
|
Protein sequence | MDIRGIIANV APLVSVLAWI LLAYLILLWA ASVLWTYRDI HSRSEDVAVQ VLAVTLALVL PFGGVLLHLI LRPRQTLTQK YERMLEEEYL RRNLEDPHVC PTCQRPVEPD FILCPHCQTA LRRRCGSCGR VIDLAWSICP YCGDDGTGVL QRPSYRQRVE TEHAQLYER
|
| |