Gene Rcas_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3718 
Symbol 
ID5541220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4876908 
End bp4877417 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content58% 
IMG OID640895829 
Producthypothetical protein 
Protein accessionYP_001433776 
Protein GI156743647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00431162 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGATATTC GTGGAATTAT TGCCAATGTT GCGCCGCTCG TGTCGGTGCT GGCGTGGATA 
TTGCTGGCGT ACCTGATCCT GCTCTGGGCA GCATCGGTGT TGTGGACGTA CCGCGATATT
CATAGCCGAA GCGAGGATGT GGCGGTGCAG GTGCTGGCGG TGACGCTGGC TCTGGTGCTG
CCGTTTGGTG GCGTCTTACT GCACTTGATC TTGCGCCCAC GCCAGACGCT GACACAAAAA
TATGAACGGA TGCTCGAAGA AGAGTATCTG CGCCGCAATC TCGAAGACCC CCACGTCTGC
CCGACATGCC AGCGACCTGT CGAACCGGAT TTTATTCTCT GCCCCCATTG CCAGACGGCG
CTGCGTCGCC GTTGCGGCTC GTGTGGTCGC GTCATCGACC TTGCCTGGAG CATCTGTCCC
TATTGTGGCG ATGATGGCAC GGGTGTGTTG CAACGCCCCA GTTATCGCCA GCGTGTCGAA
ACCGAGCATG CGCAACTGTA TGAACGATAA
 
Protein sequence
MDIRGIIANV APLVSVLAWI LLAYLILLWA ASVLWTYRDI HSRSEDVAVQ VLAVTLALVL 
PFGGVLLHLI LRPRQTLTQK YERMLEEEYL RRNLEDPHVC PTCQRPVEPD FILCPHCQTA
LRRRCGSCGR VIDLAWSICP YCGDDGTGVL QRPSYRQRVE TEHAQLYER