| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3674 |
|---|
| Symbol | |
|---|
| ID | 5541176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4804692 |
|---|
| End bp | 4805714 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640895794 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001433741 |
|---|
| Protein GI | 156743612 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.52317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTT TTGCGCTCAC ACTGCTCACA CTGGCGCTGA TTATACTGCT GCTTGGCAAG
AGTGCGTCGC GTCTGGCGGA AAGCATCTCG CTCTGCTCCA TCGGTCTGGC GCTGGTGCTG
GTCGAGCGCA TCCTTGTCGC CATCCGTCGC CGGGTGTCGT CTGGGGTGAG TTTCGTCGCT
TGCGCCAGAG CGGTCCATCG GCTGCGACAG GCGTCGCGTA CATCGGGGAT GCGCCGCGCC
AATGCGCCTT GTCGCGTGTT TGACGATACC ACCGTAGCGC CGGCGCGCGC TGTCATGCGG
GCAAGAGCGC AGCATCATGC TGTCCCGCAT GGTGTGTCGG GGGATCGGGT ACTGGCGCGT
CTCCGTCGGA CTGCACTGCA CGAGGTGCTG CTGGCGCGCG ATGAGTACAC CAATCGGTGC
GTCATTATCA AACGAACGCT TCCTGGCGCA CCGACTCACG ATCTGCGTCG TGAAGCGGGC
ATGCTCTTCT GGCTCGAATG GGCGCGGCTG CCCATTCCGG CGCCGCAGTA TCTTGCCTAT
GACGAGCGTG ATGGGCGTAG TACGCTGAAG ATGACGTTCA TCGATGGACA AACGATTGAG
GAACTGGCAG GCGCGGGGCG TCTTGCGCTC TCTTCGCTCG TGCATCTTCT GGCGCGAACA
TGTGTGGCGC TTGATGCGCT CCATCGCGCC GGATATGTGC ATCAGGACAT CAAGCCCGCG
AACCTCATTC TGGATCAGAA CGGCACGCTG GTGGTGATCG ACTGGGGTTC GGCGCGTTGC
TACAATTTGC CCTACGATCC GCGCTCGATC ACCTGCACGC CGGAATTTGC CAGCCCGGAG
CAGTTGCAAG GGTTGGTGCT GCCGGGCAAT GACCTGTATG CCATCGGGAA GACTCTGGCG
GCGCTCGTGC CCGCGCCGCC GCCAGCGCTG GCGCGGGTCA TTGCGCGCGC CACCGGTCCG
TTCGCGCATC GCTACGCCAC CGGCGCCGAC CTGGCGCAGG CGCTGCTGGC GGCGGCGCAG
TGA
|
|---|
| Protein sequence | MKRFALTLLT LALIILLLGK SASRLAESIS LCSIGLALVL VERILVAIRR RVSSGVSFVA
CARAVHRLRQ ASRTSGMRRA NAPCRVFDDT TVAPARAVMR ARAQHHAVPH GVSGDRVLAR
LRRTALHEVL LARDEYTNRC VIIKRTLPGA PTHDLRREAG MLFWLEWARL PIPAPQYLAY
DERDGRSTLK MTFIDGQTIE ELAGAGRLAL SSLVHLLART CVALDALHRA GYVHQDIKPA
NLILDQNGTL VVIDWGSARC YNLPYDPRSI TCTPEFASPE QLQGLVLPGN DLYAIGKTLA
ALVPAPPPAL ARVIARATGP FAHRYATGAD LAQALLAAAQ
|
|---|
| |