Gene Rcas_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3654 
Symbol 
ID5541156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4783032 
End bp4783445 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID640895774 
Producthypothetical protein 
Protein accessionYP_001433721 
Protein GI156743592 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.544333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.731043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG CGTCGTGGGT CGAGTCGCTG GTTGCCTGGT GCAGGACGCG CAACATTGGG 
CTTTGTGTGC TGTTTGGCTC ACGAGCGCGA GGAAATGCGC GCCCCGATAG CGACTACGAC
CTGGCGCTCA AGCCTGTTCG CGCGCCAGCG CCACTTGATC GCATCGCCTG GCAGGTTGAA
CTCGAGGATC TGCTGGGTGC GAATGTCAGT CTGGTGCTGC TGACCCCCGC CACCGATCCA
GTGCTGGGGT GGGAGATCGC GCGCGACGGG CGACTTCTCT ACGAACGTGA TCGGGGGTCA
TGGATGCAGG AACGGGCGCG TCTCTGGCAT CTGTACAACG ACGCGCTTCC ATTCCGCCGC
GCCCTTGCCG AGTCGCTGCG GCGCTACGCT GATGAGGTGT TGCGTGGCTC GTGA
 
Protein sequence
MNAASWVESL VAWCRTRNIG LCVLFGSRAR GNARPDSDYD LALKPVRAPA PLDRIAWQVE 
LEDLLGANVS LVLLTPATDP VLGWEIARDG RLLYERDRGS WMQERARLWH LYNDALPFRR
ALAESLRRYA DEVLRGS