Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3621 |
Symbol | |
ID | 5541123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4730839 |
End bp | 4731594 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895741 |
Product | hypothetical protein |
Protein accession | YP_001433688 |
Protein GI | 156743559 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTATG TTATCCTGAC GCTTCTGCTG TTCATCCTTT CGTTCCTCTC AGGAATGATG GGGCTAGGGG TCGCCTTCAT TGCGACGCCG ACGCTCGGCT TGTTTGGTCT GGATCTGAAG CATGAAATCA TGCCGCTCTC GCTCTGGCTC AATGGCATTA CAGCAATCAC CGGCGCTATC ACACTGGCGC GCAAGGGAAT GGTCGACTGG CGCACCGCGC TTCCGTTGCT GGCGATCACC ACCCTTGTGG CGCCGATCGG GGTCTGGTTG CTTCAGTTTG TGTCAACCAC TACTATCTGG TGGATTTATG TCGGCGTCCT CTTTTTCCTT GCATATCGCA TGGCCTTTCC GCCGCCGCAA GACGACAGCG CGCCGCGTTC GATCGGTGAT GACGTTCGGG TAAAGGCCGG CGCGGCCAGT GCGGCGATCG GCGTTTTTGC CGGCTTCCTC GGCGTTGGTC CTGGCTTTCT GATGATGCCG ACATTGGTGT TGCTCGGTTA CAACGCGCGC ATTGCCGCTG CAACAAATGC GGTCATTGTG ACGCTGCCGT CATTCTCGGC ATTCGCTGCC CATCTGATCG ATGCGCGCTT CGATTGGCTC TTGCTCGGTC TGACATCGGT ATCCGCCATT ATAGGCGCTC AGTCCGGCGC CGCATTTATG GCGCGCCGGG TGAAGAGTCT GACTCTGACG CGCATCTTCG CTGCGGCCCT GGTGTTGCTG GCGCTGCAAC GGACGTGGAG CCTCGTCGTG GCATAA
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Protein sequence | MSYVILTLLL FILSFLSGMM GLGVAFIATP TLGLFGLDLK HEIMPLSLWL NGITAITGAI TLARKGMVDW RTALPLLAIT TLVAPIGVWL LQFVSTTTIW WIYVGVLFFL AYRMAFPPPQ DDSAPRSIGD DVRVKAGAAS AAIGVFAGFL GVGPGFLMMP TLVLLGYNAR IAAATNAVIV TLPSFSAFAA HLIDARFDWL LLGLTSVSAI IGAQSGAAFM ARRVKSLTLT RIFAAALVLL ALQRTWSLVV A
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