Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3548 |
Symbol | |
ID | 5541049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4627362 |
End bp | 4628468 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640895667 |
Product | hypothetical protein |
Protein accession | YP_001433615 |
Protein GI | 156743486 |
COG category | [S] Function unknown |
COG ID | [COG4938] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.112036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA CAATTCATCT CCATAACTTC AAATGCTTTG GAGACCAGAG CATTCACTGC GCTCCTCTGA CCATTCTCAC AGGCGCTAAC GCTACTGGAA AGTCGAGCGT CATTCAGGCG CTCCTTCTGT TACGCCAATC ACACCAACGC GATACTCTGC GTGATGGCGT CCTTCTTTTG AATGGTTCGC TCGCCACTTT AGGGACAGTA ACCGATATTT TCTACCAAAA CGCCCAGGAT AACGATCTCT CGATCGAAAT TGAAGCGTCT GAAGATATAA GATTCAAGTT TATGTTTGAG CGAGGCGAGC CGACACAGCG CGTACTTAGA GGTCAATCCC TACAGCACTA CGAAGCGATT AATCTTTTCT ATCCGCAGTT CAACTATCTC AGCGCCGAAC GTCTTGGTCC TCGAACAATC TTTCAGATGC CAGAAGACGA GCATGAATCG CACAATGTTG GTATTCATGG CGAGTATGCC GCATTTGTTG CCGGTCGCAA CCAGCAGGAG TTAATAGCCA ACGAAAACCT GGCATATACT AATGAAGAGA CTGGTGAAAC ACGTCGCGAG CTCTACCAAC AAGTGCGATA CTGGATGCGG CAAATCTTTC CTGGCTTCGA ATATGCTATC ACAGTGCTAA CGGATGCTGA TCTGGTGCAA ACCATGTTCG GCAATTTGCC AGGTCAGAGA TTGGTGCGTC CCACAAACAT TGGGTTTGGT TTGATCTATA CCCTGCCCGT TGTCGTCGCC GCTCTGGTAG CGCCCACAAA CTCGCTCCTG ATTATTGAAA ATCCAGAAGC GCATCTCCAT CCTTTCAGCC AGTCGATGCT CGGTCGTTTC CTGGCATGTA TTGCAGCAAC TGGCGTGCAG GTTATCATTG AAACTCATAG TGACCATATT CTCAATGGAA TCAGGATTGC TGTGCGCAAA GGTGCATGGG GACGTCGAAT TGCAGCAGGG CACATATCCA TTCAGTTTTT TATTCCTGGT GATGAGACAC GACCACATCG CGTCGACACG CCGACCATTT ACGCAAGCGG TGGTATTATG CCATGGCCCA TCGGTTTCTT TGATCAGTTC GACGCCGATC TCACGGAATT ACTATGA
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Protein sequence | MIKTIHLHNF KCFGDQSIHC APLTILTGAN ATGKSSVIQA LLLLRQSHQR DTLRDGVLLL NGSLATLGTV TDIFYQNAQD NDLSIEIEAS EDIRFKFMFE RGEPTQRVLR GQSLQHYEAI NLFYPQFNYL SAERLGPRTI FQMPEDEHES HNVGIHGEYA AFVAGRNQQE LIANENLAYT NEETGETRRE LYQQVRYWMR QIFPGFEYAI TVLTDADLVQ TMFGNLPGQR LVRPTNIGFG LIYTLPVVVA ALVAPTNSLL IIENPEAHLH PFSQSMLGRF LACIAATGVQ VIIETHSDHI LNGIRIAVRK GAWGRRIAAG HISIQFFIPG DETRPHRVDT PTIYASGGIM PWPIGFFDQF DADLTELL
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