| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3524 |
|---|
| Symbol | |
|---|
| ID | 5541023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4590532 |
|---|
| End bp | 4591524 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895642 |
|---|
| Product | pyruvate-formate lyase-activating enzyme-like protein |
|---|
| Protein accession | YP_001433592 |
|---|
| Protein GI | 156743463 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATA CCAGTCTTGT TCAAGCGCTC GATGATGAGA CGTTACGCTG CAATGTCTGT
CAATGGCATT GTGAATTGAA GCCGCACCAT GCCGGACGAT GCAGGGTGCG CGCCCGTGAT
GCGCATGGCA TTGCCATCCA CAATGATGGT CTTATCAGTG TTGCAACGGT TGGACCAATT
GACGAACACC GGTTCTGGCA CTTTTTCCCG GGCACCCAGG TGCTGACGCT TGGCGGTTGG
GGGTATGCGT TTCCCGAAGA TCAGCATCGC GGGCAATATG GAGCAATCCC ATCAGATGAA
CGGCAGCAAC GACGTCTTGC ACCGGAGCGC GCTGCGACCT TTGCCCTGGA TCGTCTGTGT
CGAGGAATTG TCTGGAGTTA CAGCGATCCC TCGGTGGCGC ACGAGTATGT GTTCGACCTG
CTCCGCACGG CGCGCGCGAC CAGCCGATAC ACGGGGCTTG TAACCAGCGG GTTTCTGACG
ATGGAAGCGC TCGATCAGAT CGGGCACTAT CTGGATGGCA TGTGCCTGGA ACTGCGCGCA
TTCGACGATG CCGCATATCG ACGCCTTGCC GGTGTGGAAC GATGGCGCGG CGTTCTGGAG
GTCGCATCCC ACGCCTTTCA TCGCTGGCAC TGCCATGTCG AAGTCGTTAC CCGCCTGCAT
CCCGGCGTAA ACGATTCGCC TGACCAGATT CACGGTCTGG TTGACTGGAT CCTCACGGCG
CTCAGCCCGT TCACGCCATG GCACGTCATC CCCGGCGATG CTGGCGCAGC GGCTGCCGCA
GCGGTCGCGC GCGCGCGTCG GATAGGCGCA GAGGCGGGAT TGATCTATGT GTACGGTCCA
GAACCAGGAC AGGCGACGGT CTGCCCATCG TGCATGTCGG TCGTTATCGA GCGCAGCGGC
GGCATCACAC GCGTGACAGG CATTGAAGAC GGGCGTTGCA GAACATGCGG CGCTGACCTT
CATGTGCGCA CGTCGATCTT TAAACGTGCA TAG
|
|---|
| Protein sequence | MRYTSLVQAL DDETLRCNVC QWHCELKPHH AGRCRVRARD AHGIAIHNDG LISVATVGPI
DEHRFWHFFP GTQVLTLGGW GYAFPEDQHR GQYGAIPSDE RQQRRLAPER AATFALDRLC
RGIVWSYSDP SVAHEYVFDL LRTARATSRY TGLVTSGFLT MEALDQIGHY LDGMCLELRA
FDDAAYRRLA GVERWRGVLE VASHAFHRWH CHVEVVTRLH PGVNDSPDQI HGLVDWILTA
LSPFTPWHVI PGDAGAAAAA AVARARRIGA EAGLIYVYGP EPGQATVCPS CMSVVIERSG
GITRVTGIED GRCRTCGADL HVRTSIFKRA
|
|---|
| |