| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3519 |
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| Symbol | |
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| ID | 5541018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4584266 |
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| End bp | 4585732 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895637 |
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| Product | dihydropyrimidinase |
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| Protein accession | YP_001433587 |
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| Protein GI | 156743458 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA CGATCATTAA GAAGGTTCGT GTCGTTCGTC CCAATAGTAA TGAAACGCCA
TTGCTCGACA TCGGCATCAA GGATGGCATG TTTGCGGCTG TTGAGCGCTA TCTTGATCCG
GCCGAAGCGT ATACGGTTGT TGATGGGAAC GAATGGCTGG CCTTCCCCGG TGCAATTGAC
TCGCACACCC ACATCGGCAT TTATCAGCAT CCCAGTATCG ACGCTCCGAC CGAATCGGCC
GCTGCGGTGT CGGGTGGTGT GACAACCTTG CTCACCTATG TGCGCACCGG CAGTCTCTAT
CTGAACCGGT CCGGTCCGTG CGGCGATTTT ATGGACGAGT TGCTGCACGT CTCTTCTGGA
CGTTTTTACT GCGATTACGG CTATCACGTG TCGCCGATCA GCAGCGATCA CATTGCCGAA
ATGGAGCGTA TCGTATGCGC ATACGGCGCG CCGAATTTCG GCGAGGTGTT TATGTTCTAT
GGTCTGCACG GACTCCATGG CCGCTCTGAT ACGCAGGCGC AGTGGTTGAT GCTCAAAGAG
GGCGATCATT ACGATCTGGC CCACTTCGAC TGTATTTGCC GTGAGGCGGC ACGGTTGCAA
CGCGCGTATC CAGAATTGGC GCCGCTTATT CAGGTTAGTT TTCACTGCGA GACACCGGAG
ATTCTGCGCG CTTATGAGAA GAAGATTCGC CATGAGGACC ATCTCCAGGG TTTGGCTGCG
TATAGCGCAG CCCGACCGCC GCATTCGGAA GCGATTGCGA TCAGTATCGT CGGCGCTATG
GCGCATGCTG CCGGTTTGCG TCACGTAAAC ATTCTGCATA TCAGTTCGCG CGAGGCGATG
GAAGCAACCC TGCGCTGCCG GAGCGCCTAC CCGGATGTGG ACTTTGGGAT CGAGGTTACG
GCAGGACATC TTTTGCTCGA CACCGATTGT CCAATGGGGG TTTGGGCAAA AGTAAATCCG
CCCATTCGCC CACGGGAAGA TGTCGAATAT CTCTGGGAGA AAGTGTTGGA TGGGACGGTG
CAGTGGGTCG TGACCGACCA CGCTAATTGC CCGCGTGATA TGAAAGTGGC GGCAACCGAT
CCCGGCAATA TCTGGCTGGC CAAAGCGGGT TTTGGTGGCA GCGAATATCT GTTGCCGGCT
CTGTATAGTG AAGGGGTCCG GCGCGGCCTG TCGCCCAATC GCGTTGCTGC GCTGGTTTCC
GGCAATCCGG CACGGCGGTT TGGATTGAGC CGCAAAGGCG ATATAGCCGC AGGGTATGAT
GCTGATCTTG CTCTGCTCGA TCCATCTGAG CGCTGGACGA TCCATGCCGC CAACTCGTTC
TCGGCGCAGG GCTATACCCC CTTCGAGGGC ATTGAGTTGA CCGGTCGTGT AAAGTATACC
TTCGTGCGCG GACAGACAGT GTTTGCCAAT GGTCAGATTG TGGGGGCGCC GGAGGGCCGG
TATCTCCATC GGCCCATGCG GGGGTAG
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| Protein sequence | MFDTIIKKVR VVRPNSNETP LLDIGIKDGM FAAVERYLDP AEAYTVVDGN EWLAFPGAID
SHTHIGIYQH PSIDAPTESA AAVSGGVTTL LTYVRTGSLY LNRSGPCGDF MDELLHVSSG
RFYCDYGYHV SPISSDHIAE MERIVCAYGA PNFGEVFMFY GLHGLHGRSD TQAQWLMLKE
GDHYDLAHFD CICREAARLQ RAYPELAPLI QVSFHCETPE ILRAYEKKIR HEDHLQGLAA
YSAARPPHSE AIAISIVGAM AHAAGLRHVN ILHISSREAM EATLRCRSAY PDVDFGIEVT
AGHLLLDTDC PMGVWAKVNP PIRPREDVEY LWEKVLDGTV QWVVTDHANC PRDMKVAATD
PGNIWLAKAG FGGSEYLLPA LYSEGVRRGL SPNRVAALVS GNPARRFGLS RKGDIAAGYD
ADLALLDPSE RWTIHAANSF SAQGYTPFEG IELTGRVKYT FVRGQTVFAN GQIVGAPEGR
YLHRPMRG
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