Gene Rcas_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3491 
Symbol 
ID5540990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4556596 
End bp4557240 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID640895609 
ProductN-carbamoylsarcosine amidase 
Protein accessionYP_001433559 
Protein GI156743430 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCT TCGACCACCT CGCCGACGAC TACCGTCAGC ACGGCTTAGC CGGCCGAGTT 
GGCTTCGGCG AACAGCCGGC GCTGCTGGTA ATTGACTTCA TCAAGGCCTA CACTACACCC
GGCTCACCAT TGTACGCCGC ACCCGGCGTA CCGGACGCAG TGCGCGCCAG CCAGCCGGTT
CTGGCTGTGG CCCGCACTGC CGGTATCCCG ATCATCTACA CTACTGTCGC CTATGCAGCC
GATGGTCGCG ACGGCGGTAT CTTCGTACAA AAAGTGCCGG CGCTACGCCA ACTCACCCAT
GACTCGCCGC TGATTGAGAT TGTTGATGAG CTGCACCCGC AAGCCGGCGA ACTGGTGATC
GAAAAGAAAT ATGCCAGCGC CTTCTTCGGC ACCCACCTCG CCGCCACCCT GACCGCCCTC
CGCATCGACA CCGTGATCAT GGTCGGCTGT TCGACCAGCG GCTGCATTCG GGCCAGTGCG
GTCGATGGGA TGCAACACGG GTTTCGTGTG ATCGTCCCGC GTGAATGTGT CGGTGACCGC
GCACCCGAAC CGCATCTCGC CAATCTCTTC GACATCGATG GCAAATACGG TGATGTGGTA
TCCGTAGCAG GAGTGATCCG CTATCTGAGC AGGTTCTGTA AGTGA
 
Protein sequence
MTSFDHLADD YRQHGLAGRV GFGEQPALLV IDFIKAYTTP GSPLYAAPGV PDAVRASQPV 
LAVARTAGIP IIYTTVAYAA DGRDGGIFVQ KVPALRQLTH DSPLIEIVDE LHPQAGELVI
EKKYASAFFG THLAATLTAL RIDTVIMVGC STSGCIRASA VDGMQHGFRV IVPRECVGDR
APEPHLANLF DIDGKYGDVV SVAGVIRYLS RFCK