| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3486 |
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| Symbol | |
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| ID | 5540985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4548532 |
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| End bp | 4549554 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640895604 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433554 |
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| Protein GI | 156743425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.956349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTG CATCGACCAA ACCGGTTCCT GCTGCCGATG TGCCCGCCGA GGACCCGTTC
CGCTACGGCT GGCGCTTTGT GCCCCGCCCG ACCCCCGACG ATCCCCATCA CCTCGAACAG
GTTCCGCTCA CGCTGGAGGA CGTCCTGCAC CCTGAAACGG GAGATTTCAT TGTGCATAGC
GACCGCCACG AGACCGACCG GATGTACCTC ACTGCTGTGC TGCGCGCCCG TCTGGAGGAG
GCGGGGGTCG CCATCGTCCT GAGCGATGTG CGCATTGCGT GGGACATCCC CGACCTGCGC
CCGCACGGAC CGGATGTGAT GGTCATTCCC GGCATCCGCG AACGGCAGGA CTGGAGCACA
TTCGAGGTGG CGGTCGAAGG CGCGCGTCCG GCGCTGATCA TCGAGATCAC CTCGCCGGAG
ACGCGCGAGA ACGACCTGGA GCGCAAGGTG GAGCACTACG CGCGCGCGGG GGTGGCGCAG
TACGTGATTG TGGATGACGC CGGAAAAGGT CGGGGGAAGC GGCGGCTGCG ATTGCTCGAC
TACCGGTTGG AGGCGGGGAT GTACCGCCTG CATCCATTGG ATGCTGCGGG ACGGGTGCAT
CTGGCGATTG CCGATGTGTG GCTGGGGGTG GAGGGCGATC ACGTCGTCTG CTACGACGAC
CATGGCGTGG CATTCGGCGA CTATGCGACG GTGGTGCGGC AGGCGGCGGA CGCGGAAGAA
CGAGCGCGGT TGGAAGCGCA GGCGCGCCAG GAAGCCGAGA AGCGCGCACA ACGCGAAGCG
GAGCGCGCAC GGCGCGAAGC CACAGCGCGG GCTGCTGCGG AAGCACAGGC GCGGCGCGAG
GCGGAACGGG CGCAACGTGA AGCGCAGGCG CGGGAAGCCG AAGCGCAGGC GCGGGCTGCT
GCGGAAGCAC AGGCGCGGCG CGAGGCGGAA CGGGCGCAAC GTGAAGCGCA GGCGCGCGCC
GAAGTTGAAG CGCGCCTGCG CGCCCTCGAA GAAGAACTGC GCAGGCTGCG GAATGGTGCA
TAG
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| Protein sequence | MTTASTKPVP AADVPAEDPF RYGWRFVPRP TPDDPHHLEQ VPLTLEDVLH PETGDFIVHS
DRHETDRMYL TAVLRARLEE AGVAIVLSDV RIAWDIPDLR PHGPDVMVIP GIRERQDWST
FEVAVEGARP ALIIEITSPE TRENDLERKV EHYARAGVAQ YVIVDDAGKG RGKRRLRLLD
YRLEAGMYRL HPLDAAGRVH LAIADVWLGV EGDHVVCYDD HGVAFGDYAT VVRQAADAEE
RARLEAQARQ EAEKRAQREA ERARREATAR AAAEAQARRE AERAQREAQA REAEAQARAA
AEAQARREAE RAQREAQARA EVEARLRALE EELRRLRNGA
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