Gene Rcas_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3464 
Symbol 
ID5540963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4523876 
End bp4524355 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID640895582 
Producthypothetical protein 
Protein accessionYP_001433532 
Protein GI156743403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0166666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGA CCGACGAGCA ATGGGCTGTT GTCGGGCCGC TCATCCCCAG GATTCCCAGA 
CTGCCCGATG GACGCGGGCG GTCCCGCGTG GATGATCGAG GTGGGTTGAA CGGCATGCGG
TGGATCCTGC GCACGGGCGC TCCCTGGAAC GACCGGACTG ATCAGGACTC CTCGGCAGGG
ATCAACGCGG TGGTTGTGGC GGGCATCACG GGCGCTCCCT GGAACGACCG GACCGATCAG
GACTCCTCGG CAGGGATCAA CGCGGTGGTT GCGGCGGGCA TCACGGGCGC TCCCTGGAAC
GACCGGACCG ATCAGGACTC CTCGGCAGGG ATCAACGCGG TGGTTGCGGC GGGCATCACG
GGTGCTCCCT GGAACGACCG GACCGATCAG GACTCCTCGG CAGGGATCAA CGCGGTGGTT
GCGGCGGGCA TCACGGGCGC TCCCTGGAAC GACTGGACCG ATCAGGACCC TTCATCCTAG
 
Protein sequence
MDVTDEQWAV VGPLIPRIPR LPDGRGRSRV DDRGGLNGMR WILRTGAPWN DRTDQDSSAG 
INAVVVAGIT GAPWNDRTDQ DSSAGINAVV AAGITGAPWN DRTDQDSSAG INAVVAAGIT
GAPWNDRTDQ DSSAGINAVV AAGITGAPWN DWTDQDPSS