| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3459 |
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| Symbol | |
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| ID | 5540958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4517971 |
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| End bp | 4519029 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895577 |
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| Product | acetyl-lysine deacetylase |
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| Protein accession | YP_001433527 |
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| Protein GI | 156743398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01902] N-acetyl-ornithine/N-acetyl-lysine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0059344 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCTCG ATCCTGTCGC GCTGCTGACC CGCATGCTGG AGATTCCGTC TGTCTCCACC
CACGAAGCCG AACTGGCGCG CGTTCTGGCG GCGGAAATGG CGCGTCTGGG GTTCGAGAGT
TTTGTCGATG AAGCCGGGAA TGCCATCGGC ATCGTTGGCG AAGGTCCCGA TGTGGCGCTT
TTGGGGCACA TCGACACGGT TCCCGGTGCA ATACCGGTGC GTATCGAGGA CGGCAAACTT
TACGGTCGTG GCGCGGTCGA TGCCAAAGGA CCATTCGCGG CATTCATCTG TGCGGCGGCG
CGTCTGGCGG TGTCAGGAAC GCGGCTACCC TTCCGCCTTG TGCTGATCGG CGCTGTGGAA
GAAGAAGCCG CTTCGTCGAA GGGCGCGCGC TATGCCGCTG GGCGCTACCA TCCGGTCGCT
TGCATTATCG GCGAACCGAG CGGTTGGGAC CGCATCACGC TCGGTTACAA GGGTCGTCTG
CTGGTCGATG GAGTCTGGGA ACAGCCGATG AGCCACAGCG CCGGACGCGA GACCTCGGCT
GCCGAACGGG CGGTTGCGTT CTGGAACGAC GTGGCTGCCC ATTGCGCAGC GTACAACCAG
GGGCGCGAGC GCCTGTTCGA TCAATTGCTC CCTTCGTTGC GCTCTATCTG GAGCCAGAGC
GACGGCCTGA CCGAGCGGGC GGAACTGACG ATTGGTGTGC GCCTGCCGCC TGACGTTCCG
CCTGAGACGC TGTCATCCGT CATTGCAGAG CGTTCCCACG GCGGCGTGTT GCGCTTCCGC
GACCTCTGCC CGGCATACCA GGCGGAGAAA AACACCCCGC TGGCGCGCGC GTTTCTCAAG
GGCATTCGCG CGGCGGGCGG AACGCCGGGC TTCCTGCTGA AAACCGGCAC CTCCGACATG
AACATTGTCG GACCGGTCTG GGGCTGCCCT ATCCTCGCCT ATGGACCGGG CGATTCAAGC
CTGGATCACA CCCCGAATGA GCATATCGTG ATCGAGGAAT ACCTGCGCGC TATCGAGGTG
CTGGAGCATG CGCTGCGGCG GTTGGAGATT GGCGGGTGA
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| Protein sequence | MTLDPVALLT RMLEIPSVST HEAELARVLA AEMARLGFES FVDEAGNAIG IVGEGPDVAL
LGHIDTVPGA IPVRIEDGKL YGRGAVDAKG PFAAFICAAA RLAVSGTRLP FRLVLIGAVE
EEAASSKGAR YAAGRYHPVA CIIGEPSGWD RITLGYKGRL LVDGVWEQPM SHSAGRETSA
AERAVAFWND VAAHCAAYNQ GRERLFDQLL PSLRSIWSQS DGLTERAELT IGVRLPPDVP
PETLSSVIAE RSHGGVLRFR DLCPAYQAEK NTPLARAFLK GIRAAGGTPG FLLKTGTSDM
NIVGPVWGCP ILAYGPGDSS LDHTPNEHIV IEEYLRAIEV LEHALRRLEI GG
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