| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3450 |
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| Symbol | |
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| ID | 5540949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4507059 |
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| End bp | 4508276 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640895568 |
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| Product | SCP-like extracellular |
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| Protein accession | YP_001433518 |
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| Protein GI | 156743389 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.538197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAT TGCCGGTTCG CATCGTCGTC ATTCTGGGTC TCGCCGCCTT TCTGAGCCTC
TCGCTCGACG CCGCAGCGCG CGTCCGTCCC ACGCCCGCCG CGCCGCTGGC GTTTCCGACT
TCGACGTTGG CGTTCCCGAC TCCGTCTGAT GATTCGGTCG CTGTTCCATT GGCGTTTCCG
ACTCCGCCAG CGACGCCGCC CGCCGCGCCG CTTGCGTTCC CAACTCCGCC GGTGACGCCG
CCCGCCGCGC CGTCGGCGTT TCCGACCTCG CCGGCGGACC CGGTCGCCGC GCCGCAGAGC
GCGCCGCTCA CCGTCTATCT GCCGCTCATC GCGCGCCCGG AGCCGTATCC CCCGGCGCGC
CGCGACATCG AACTTGAGTT TATTCGCCTG ATCAACCTGG AGCGCGCCGC CCTCGGTCGC
CGCGCCCTGC GCGAAGAGCC GCGCCTGACC CAAGCCGCGC GCCGCCTGGC CTACGACCTC
GCCGCGCGCG GCACAGTCAG TCACATCGGC TCGGACGGCT CAACGCCCGC CTCGCGCGCG
CGCGACGCCG GCTATCCCTG GTGGTCGGGC GAGGTTGCGC TGGGCGCCGC CGTCGACGCC
GCCGATGCGG TGAAGATTTA CCGCACCAGC CCGCCGCACT GGAACGACCT CATGAACCCT
GACAGCACCG TGATCGGCGT CGGCGTCGCG CCGGTGCTCG TCGGTCCGTC CGCCGGCCGC
CGCGTCGCCA TCCCGGCGAT GCTCGGCTAC GATCCGCCTC CGCCGGAAGG CGAGGTGGTC
GCGGCGCTCC TGGCGCGCAT CAACGCGCTG CGCGCCGAGC GCGGCGCGCC GCCGTTGACC
CTCAACGCCG CGCTCAACGC CGTCGCCCGC CGCGTCGCCG ACGACCTGAC CGCCCGAAAC
GTCTGCGGGA CCCTTCCATC GCACGGTCCG CTCACCCTCG ACGACTGGGC GCGCGACGCC
GGGTATGGAG GCAGCGTCAC CACGCGGCAC AACGTCACCT GTCCCTATGA CCCGGTGCAG
CTCCCCTGCG GACTCGATGC GTCCTTCGGC GGCGCGTCCG CCGATGAGGT CGCGCGGCGT
ATCATGGAGT ACGGCGCAGC GGGGGCGCCC TGCTCCGGGA ACTTCAGTCA TAACCGGCTC
GCCGACTCGA CGCAAACTGA CGTAGGAATC GTCTTTTACC GCTGGGGCGC GGTCGTCGTC
ACCGGTCGCA GTCCCTGA
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| Protein sequence | MPTLPVRIVV ILGLAAFLSL SLDAAARVRP TPAAPLAFPT STLAFPTPSD DSVAVPLAFP
TPPATPPAAP LAFPTPPVTP PAAPSAFPTS PADPVAAPQS APLTVYLPLI ARPEPYPPAR
RDIELEFIRL INLERAALGR RALREEPRLT QAARRLAYDL AARGTVSHIG SDGSTPASRA
RDAGYPWWSG EVALGAAVDA ADAVKIYRTS PPHWNDLMNP DSTVIGVGVA PVLVGPSAGR
RVAIPAMLGY DPPPPEGEVV AALLARINAL RAERGAPPLT LNAALNAVAR RVADDLTARN
VCGTLPSHGP LTLDDWARDA GYGGSVTTRH NVTCPYDPVQ LPCGLDASFG GASADEVARR
IMEYGAAGAP CSGNFSHNRL ADSTQTDVGI VFYRWGAVVV TGRSP
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