Gene Rcas_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3444 
Symbol 
ID5540943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4497290 
End bp4497853 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID640895562 
ProductCopG/DNA-binding domain-containing protein 
Protein accessionYP_001433512 
Protein GI156743383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.430101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0328627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG AGAAAAAACA ACAGTTCAAT GTCTACCTGC CGCCATCGCT GATTCGCGCC 
ATCAAGCACG CGGCGATCGA TCGTGGCGTC TCGCTCTCGC GCCTGGTCGA AACGACGCTG
CGCGCGGCGC TCGAAGAACC GCCAGCCGCT TCACAACAGT CCGCTCAAAC TGCGGCAATC
CCTTTGACAC CCATGCCGAT TATCTCCACC CGCTTTTTTG ACGACGCTGT TGATTTCTAC
CAGCGCCTCG GCTTCCAGGT GATAGTGCGT GATCGTGTGC GCAAATGGGC AGAACTACGC
ATGGGTGATA TGCTGTTGGG CATTCACGAA GTGGCCGATG CTGACGCGAG CGCCGACGCC
GGAGCCGCGT CTCCCCCGTC GGTGACCCTG ACGTTCGACT GTCGCGACGT CCTGGAGAAT
ATCCTCTTAT ATCTGGTGAG TCGCCGCATT TATCTCCTGG GTGCGCCGAT CGTCGATGAA
ACGTTTGGTC GGTCGTACAG CATCCGTGAT CCTGATGGAC GCAGGATTGA ACTCGTCGAG
CGGGATCGCA CCCTGTACGA CTGA
 
Protein sequence
MSDEKKQQFN VYLPPSLIRA IKHAAIDRGV SLSRLVETTL RAALEEPPAA SQQSAQTAAI 
PLTPMPIIST RFFDDAVDFY QRLGFQVIVR DRVRKWAELR MGDMLLGIHE VADADASADA
GAASPPSVTL TFDCRDVLEN ILLYLVSRRI YLLGAPIVDE TFGRSYSIRD PDGRRIELVE
RDRTLYD