Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3444 |
Symbol | |
ID | 5540943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4497290 |
End bp | 4497853 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895562 |
Product | CopG/DNA-binding domain-containing protein |
Protein accession | YP_001433512 |
Protein GI | 156743383 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.430101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0328627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATG AGAAAAAACA ACAGTTCAAT GTCTACCTGC CGCCATCGCT GATTCGCGCC ATCAAGCACG CGGCGATCGA TCGTGGCGTC TCGCTCTCGC GCCTGGTCGA AACGACGCTG CGCGCGGCGC TCGAAGAACC GCCAGCCGCT TCACAACAGT CCGCTCAAAC TGCGGCAATC CCTTTGACAC CCATGCCGAT TATCTCCACC CGCTTTTTTG ACGACGCTGT TGATTTCTAC CAGCGCCTCG GCTTCCAGGT GATAGTGCGT GATCGTGTGC GCAAATGGGC AGAACTACGC ATGGGTGATA TGCTGTTGGG CATTCACGAA GTGGCCGATG CTGACGCGAG CGCCGACGCC GGAGCCGCGT CTCCCCCGTC GGTGACCCTG ACGTTCGACT GTCGCGACGT CCTGGAGAAT ATCCTCTTAT ATCTGGTGAG TCGCCGCATT TATCTCCTGG GTGCGCCGAT CGTCGATGAA ACGTTTGGTC GGTCGTACAG CATCCGTGAT CCTGATGGAC GCAGGATTGA ACTCGTCGAG CGGGATCGCA CCCTGTACGA CTGA
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Protein sequence | MSDEKKQQFN VYLPPSLIRA IKHAAIDRGV SLSRLVETTL RAALEEPPAA SQQSAQTAAI PLTPMPIIST RFFDDAVDFY QRLGFQVIVR DRVRKWAELR MGDMLLGIHE VADADASADA GAASPPSVTL TFDCRDVLEN ILLYLVSRRI YLLGAPIVDE TFGRSYSIRD PDGRRIELVE RDRTLYD
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