| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3421 |
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| Symbol | |
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| ID | 5540920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4459336 |
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| End bp | 4460748 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895539 |
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| Product | UDP-glucose/GDP-mannose dehydrogenase |
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| Protein accession | YP_001433489 |
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| Protein GI | 156743360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.599581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.35369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCGTTGTCGG CACCGGTTTC GTCGGTCTGA CTCACGCAGC GGTCTGTTCG
GAGTATGGCC ACGAAGTCTA TGCATACGAT ATTGATCACC GGCGTATCGA GGCGTATCGG
TCGTGTCGCC AGGATGCAAT TGAGCACTAT GTGCATGAAC CAGGGCTGAC GAGCATTATC
CTCGAAAACC ATGGACGGTA TCTGTTCTTC GTTGACGATG TCGAACCGGT AATCGAAGGC
GCTGATGCGC TCTTCCTGTG TTTGCCGACG CCGCCCAAGC CGGATGGCTC ATCGGACCTG
AGTTACTACT TTGCGGCAGT GCGCCATCTG GCGGAACTAC TGGCGCGCCG CCAGGATCAA
CGCCGCGTGG TGGTGATCAA CAAAAGCACA GTGCCGATTG GCACAGCGCG GCAGCTGGAA
CGGGTGCTGC GTGACTACCA CGTGCCCAAC GTGGGGGTTG CCTCAAACCC TGAATTTCTC
CCGGAGGGTG ATGCGGTCGA GAAGTCGCGC CGTCCGGATC GCGTGGTGGT CGGCGCCGAC
TGTGAGGAAG ATTTTCGTAT CATCCGCCGG ATTTACTCGC AATTCGTCAA CCACGTGCGC
ATTCGCTACA TCGAAACCAC GCCAGAAACC GCAGAAGCCA TCAAGTATGT GGCCAATACG
CTGCTGTTGA CCTACATCTC GTTCTGGAAC GGCGTTGGTG CGCGTCTTGC CGAAACCTTC
CCAAATATCA TCATGGAAGA TCTGAAGCGT GGCGTTACTG CCGACGCGCG CATTAGCACA
TGGGGGTCGT ATGTGTCGAA CGGCGCCGGC GGGTCGTGCT TCGGCAAGGA TATTCAGTCA
CTCATCTATC AATTGAAGAC GGCAGGTCAA TCGGTCGATA TTCTGCAATC GGTCTATGGC
ATCAACGAGT ATCAGAAAAC CTATCTGATT GATCGCGCGA TCCGGGAAGC CGGGGTCAGT
TTTAACAACA AAACGGTGGC GCTGCTGGGG CTGGCGTTCA AACAACGCAC CAACGATATG
CGTGACTCGT CGTCGCTCAA GGTGGTTGAG GCATTACTGG GCAGAGGTGT GCGCGCCATT
CGCGCCTACG ATCCAATGGC GCTGCGTGAA GCGCGCAAGT TCTTCGATCC AGAGAAGAAC
CATCTGTTCG AGCGCATTTC CTACCATACG TCGGTGCGCG AGGCGCTCGC CGGAACCGAT
ATGCTCTTCA TCTCCACCGA TTGGGAAGAG TTTCGCGGTC TGTCGCGCAC CATCGAAGAG
ACGGTCGCGC CGCCCTATCT GGTCATCGAT GGTCGTCGAA TGATTCCCGA TTATACGGAA
TTGGTTGCGG CTGGCTACGG GTACCTTGCC GTTGGTTCGC CGTACATGCC ACCCGGCGAT
GTTCCGCCGA ACCGCGTTGG ACGACGGGGC TGA
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| Protein sequence | MKIIVVGTGF VGLTHAAVCS EYGHEVYAYD IDHRRIEAYR SCRQDAIEHY VHEPGLTSII
LENHGRYLFF VDDVEPVIEG ADALFLCLPT PPKPDGSSDL SYYFAAVRHL AELLARRQDQ
RRVVVINKST VPIGTARQLE RVLRDYHVPN VGVASNPEFL PEGDAVEKSR RPDRVVVGAD
CEEDFRIIRR IYSQFVNHVR IRYIETTPET AEAIKYVANT LLLTYISFWN GVGARLAETF
PNIIMEDLKR GVTADARIST WGSYVSNGAG GSCFGKDIQS LIYQLKTAGQ SVDILQSVYG
INEYQKTYLI DRAIREAGVS FNNKTVALLG LAFKQRTNDM RDSSSLKVVE ALLGRGVRAI
RAYDPMALRE ARKFFDPEKN HLFERISYHT SVREALAGTD MLFISTDWEE FRGLSRTIEE
TVAPPYLVID GRRMIPDYTE LVAAGYGYLA VGSPYMPPGD VPPNRVGRRG
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