| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3407 |
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| Symbol | |
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| ID | 5540906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4437618 |
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| End bp | 4438841 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895525 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433475 |
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| Protein GI | 156743346 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG AAGCTCGCCC GATTCGTTTT TCACCGACGG TCAAACTGAT CACAATCGCG
TTGATTGCGG CGCTCTTCTT TTGGTTGATC CGCGGGTTGG GGAATGTGCT GATCCCCTTT
GTGGGGGCGG CAATTACGGC CTACCTGTTC AATCCGCTCA TCACCTGGCT GCACCGTCGC
GCCCGTATTG GACGGGCGAT CTGGATCGGA CTGCTGTATG TCGTGATCGG GGGCATCATC
TATGGTCTCT GGCGGACGCT CGGACCGGTG ATCGAACGTG AATACAGCGG TTTGCAGGCG
CAGATACCGC ATACGCTGAA CCTTATCCAG CAGGAGTTGC TGCTGCGTGA TCGGATCATG
GTTGCAGGAA TCAGTGTCGA GGTCGCGCCG ATCACGGAGG CGCTGCGTGA AGCGCTCGCC
GATTTCGGAC GGCGCATTCC GGAGCATGTG CCCCATCTGG TCGCTGTCGC CTTCGAGACA
TTGCTGCTGT TCGTCACCTA TCTGATTGTG ACCTTCTATC TGCTACTGGA AGCGCCGCGC
ATCGTTGAGT GGCTCTACGA GCTTGTGCCT GCGCCCTACC GTGCCGAAAT TCGCACGCTT
GGCAGTCACA TTGATCACAT TCTGGCAGGG TATGTGCGTG GAACATTGAT GCTGATTCCA
ATCATGGCGA CGCTGACAAC GATTGCGCTG ACGCTGCTGG GGGTGCGTTA TGCGCTGGTG
TTGGGGATTG TGACCGGCAT TCTGGAGACG CTCCCGCTTC TTGGTCCGTG GTCGGCGGCC
GGCATTGCGA TCACTGTGGC GCTCTTTCAG ATGCCGGCGC CGTGGGGGTG GCCTGCGTGG
CTGATCGCGG GGTCGATTGG ATTGACCTAC TTCGTGCTGC GCATGTTTGA GGATAATTTC
ATCATTCCGC ACGTGGTCGG TCCCGCAGTT CACCTGCATC CCATGCTGGT CATCTTTGCC
ATTCTGGCAG GCGGCGCGCT CGGCGGACCG TTCGGGTTGT TTGTTGCAAT CCCGGTTACC
GCAGTGGCGC GCCTGCTGTT GCGTTACCTG TACTACAAAC TGATCGACTC GCCCGATTTG
CCGCTCGAAC AGGCGCCTGC GCCTGATGTG CCGGCGCCTG TGTCGTCGGA TGGCGTCCAA
CCCGATCAGG CGCCGGTCTC TGGGGATCAT ATGCCTATAA AATCAGCGGA CCAAACCGAG
AAAGCGGTCA CTCCGGCAAA CTGA
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| Protein sequence | MSAEARPIRF SPTVKLITIA LIAALFFWLI RGLGNVLIPF VGAAITAYLF NPLITWLHRR
ARIGRAIWIG LLYVVIGGII YGLWRTLGPV IEREYSGLQA QIPHTLNLIQ QELLLRDRIM
VAGISVEVAP ITEALREALA DFGRRIPEHV PHLVAVAFET LLLFVTYLIV TFYLLLEAPR
IVEWLYELVP APYRAEIRTL GSHIDHILAG YVRGTLMLIP IMATLTTIAL TLLGVRYALV
LGIVTGILET LPLLGPWSAA GIAITVALFQ MPAPWGWPAW LIAGSIGLTY FVLRMFEDNF
IIPHVVGPAV HLHPMLVIFA ILAGGALGGP FGLFVAIPVT AVARLLLRYL YYKLIDSPDL
PLEQAPAPDV PAPVSSDGVQ PDQAPVSGDH MPIKSADQTE KAVTPAN
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