| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3405 |
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| Symbol | |
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| ID | 5540904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4435704 |
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| End bp | 4436777 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895523 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001433473 |
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| Protein GI | 156743344 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCT TTCTTCGCGC GCTGCTGTTA GCGGTAATTG TGTACGAGTT CCTTTCCGAC
ATTTGCGAGT GGCGTGGGTT GAGTTGGGGG CATCCGGCGC TGCGTCCGTT GTTGGCGCTG
CTGGCGCCAG CGTTGCATCC ACGCCATGTC ACGTGGCGGC AACGCGCCTC GGCACTGGCG
CTGGCGGCGC TTCCGGCACT GATGGTTCAG GCGGTTGCTG CGGGTGTGCG GCGACGCGCG
CTGGACTCAC GAGCGACGCT GAAACCGGGG TTGTACGATG ACTGCACGGT TACGCGCATC
GATATTCCGA TGCCGGAAGC GTTTATGCCA GCATTGTATG TTGTGCCGCG CGCAGGCGCG
CAGACGGCAG TGGCAGTGTT GCACGGCTCG GGGTGCGATA AAACCTACTT CGCATGGCGT
CTGACCAATG CGTTATTGCG GCAGAGAATG GCTGTGTTGC TAGTCGATCT CGACGGCCAC
GGCGAGAACC CGCGGGTGCA GCGTTACCCG CAGATGCTCG AGTGTGCGAC GGAGGCGGTC
CGCTGGTTAC GCGCCCGCCA CCCACGGGTT GGCATCGTCG GCATCAGCCT GGGAGGATGC
CTGGCGGTGC GCGCGGCGGC AGACGGTCTG GACATTAACG CGCTGGCAAT CCTGGAAGCG
CCGCCGGTTT TGCGATTCGA TCATCACGAC CGGTTGCACG AGGCACGCAT GCTCTTTCAG
CCCTATGTGG TCGATCTTCT CCGCGAGGCG TCGATTGTCC ATCTGGGGAG CGCCGTCTAT
CGCCTGGTGC GCGCGCAGCG GAAGCCGAGC ATTCGCGCGG CGATCAGCAC CTGGGATCTG
ATCGCCGCGT GCGATCTGTG TGGCAGCCTG GCGCGCCTGA CGACGCCGCT GCTCCTGGTG
TATGGCGAGC GTGATGCGAT TGTCAAACCG GCGCAGGCGG AGGAGGTCTG GCGCGCTGCG
CCACCCGGCG CCACCATGTT GCTCGTGCCG GACGCAAGTC ACCTGACCCT GATCATGCAC
CCGGAGGCGC TCCAGCACAT GGCGGCGTGG ATGGCGGAGC GTTTGAACGC CTGA
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| Protein sequence | MPLFLRALLL AVIVYEFLSD ICEWRGLSWG HPALRPLLAL LAPALHPRHV TWRQRASALA
LAALPALMVQ AVAAGVRRRA LDSRATLKPG LYDDCTVTRI DIPMPEAFMP ALYVVPRAGA
QTAVAVLHGS GCDKTYFAWR LTNALLRQRM AVLLVDLDGH GENPRVQRYP QMLECATEAV
RWLRARHPRV GIVGISLGGC LAVRAAADGL DINALAILEA PPVLRFDHHD RLHEARMLFQ
PYVVDLLREA SIVHLGSAVY RLVRAQRKPS IRAAISTWDL IAACDLCGSL ARLTTPLLLV
YGERDAIVKP AQAEEVWRAA PPGATMLLVP DASHLTLIMH PEALQHMAAW MAERLNA
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