| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3389 |
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| Symbol | |
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| ID | 5540888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4417782 |
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| End bp | 4420553 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895507 |
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| Product | NADH-quinone oxidoreductase, chain G |
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| Protein accession | YP_001433457 |
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| Protein GI | 156743328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATG TGACCCTGGT CATCGATGGA CAGACAGTGA CCGTCCCGGC AGGAACGAAT
ATCGTCGATG CAGCGCGAAG CGTCGGCGTT GCCATTCCGG TCTTCTGCTA CCATCCTAAA
CTCAAGCCGG TCGGTATGTG CCGAATGTGT CTGGTTGAGG TGTGGACGCC GAAGATTGAT
CCGACGACGC GCCAGGTGGT GATCGGTGAG GATGGCAAGC CTGTGCTGGC GTTGATGATG
GGAAAACTGC AACCGGGCTG CGTGACGCCG GTCAGCGAAG GCATGGAGGT GCGCACGACG
ACCCAAAAGG TGCGGTTTGC GCAGAAAGGT CAGCTCGAAT TCCTGCTGAC CTCGCATCCG
CTCGATTGCC CGGTATGCGA TAAAGGTGGC GAGTGCCCGC TGCAAAACCT GACGATGCAG
TTCGGTCCGA GCACTTCACG CTTCGATTAT GCCGACAAGA TTCATTTCGA GAAGCCGATC
CCGCTTGGCG ATCTGATTTT TCTGGATCGT GAACGCTGCA TTCTCTGCTC GCGGTGTGTG
CGCTTTCAGG ACGATATTGC CGGCGATCCG GTGCTTGGCT TCGACAACCG CGGTCGCGCC
TGGGAGATTA TCTCGAAGTC CGATCCGCCG TTCGACTCGA AGTTTTCGGG CAATACCACC
GATATCTGCC CGGTCGGCGC GCTGACGACT GCCGATTTCC GTTTTAAGGC GCGTGTCTGG
GAATTGCGCC CGGTTCCCAG CATCTGTCCG CACTGCCCGG TAGGGTGCAA CATCTCGCTC
GATATGCGCT ACGACCGTAT CATGCGGGTC ATGCCGCGTG AAAATGAGTA TGTCAATGAA
ATCTGGATTT GTGACAAGGG GCGGTTTGGA ATGCGCTTCA TCGAAAGCCC GGAGCGCTTG
CGCCAACCGC TCATTCGTAA AGGCGATACA CTGACGCCGG CAACATGGGA TGAGGCGATT
ACGCTGGTGG CTGAAAAACT GAGCGCCATC CGCACCCACG CTGGCGCGGC GGCGCTGGGC
GGGCTGGCGG GTCCCGATCT GCCGAACGAA GATCTCTATC TGTTCCAGAA ACTGTTCCGT
CAGGTGTTGA AGTCGCCAAA CCTCGACTGC TGCACCGGCG CGCCGGGAGA AGCGGATCTG
ATCGATCTGG GCGCAACGCT CGGCGTCGGT AAGGGAACCA ACCTGTCGAA CCTGGGTGCG
GGAACGGCGG TGCTGGTCGT TGGCGCGGAT CCCGAAGAGG AAGCGCCACT CTATGTGTTG
CGTCTGCGTG GTATCGTCGC GCGTGGCGGC GATCTGACGG TCATCAACCC GTATCCGACG
AAACTGGATC GTACCCCGGC GCGGGTGATT CGCCCGCGTG CCGGGGCAGA GGCGTTCGTT
GCGCTGGCGT TGCTGAAGAC CCTGATCGAG GAAGAATTGA TCGCTGTCGA CTTCGTGGAG
CGACGAGTGC AGGGTCTCGA CGACCTGAAA GCGCGTCTGC GCGATTGTAC CGTTGTGTCG
CTCTGCGATG CCGCTGGGAT TGCAGAAGAC GATGTGCGCG CAGCGGCTCG CGTGTTTGCG
AAAGCCGATC ACGGGATCAT TATCTACGGC CGGGTGGCGC TGGCGGTTGG AGCGGATCTG
ATCGATGTGC TCGCCGACCT GACGCTCCTG ACCGGTCATG TCGGCAAGCC CAATAACGGC
ATTATTCCGC TCTTTCCCGG TGCGAATGTG CGTGGTGCGC TCGATATGGG GGTGAATCCA
GGCACCGGCA AGAAACGAGG CTTGAAGGCG CGTGAGATGT GGACTGCGGC GCGTGAGGGG
CGTTTGCGCG GCATGATCAT TGCCGGAATG AACCCGGTGC GCGATCATCC GGCAGTGGCT
GAGGCGCTCG ATGCGCTGGA GTTTTTGGTG GTGCAGGACA TGTTCCTCAC CGAGACGGCG
CAACGCGCCG ATGTGGTGCT GCCAACGGCG TCGATCGCCG GTCGCGAGGG GACGTTCACC
AATGCCGAGC GGCGGGTGCA GCGCTTCCGT CAGGCGCGCA TTCCTGAATA CAATACTCCG
GCCGGATGGG ACGTGGCGCA ACGTCTTGCG CGCGCGCTGA TCGCTCTCGG TATCACGCCG
GACGTTCCTG ATGGTCAGGG GGATGGACGC GCCGCACCGC GCGCGGCGGC GCAAACCGCA
GCAGCAACCG CTTCCCCCGA CCATTGGGAT TATGTGGTCG CCGGTGATGT GGCGGATGAG
ATTGCAGCCA GGGTGCGCGG CTACGCCGAT ACGACCTATG AAAGCCTGGG GTTGACGCGC
AAGCCGCAGT GGGGACGGCA GCCGAATGAG GCGATCTTCT ACGACGGCAC CTCCTACGAA
AATACCGAAG GCGTCGGCGT GCAGATCGCG GCTGAAGCCG ATAATGCGAA AACCATGTTT
TTGCTGCGCG CTCGTGTGCC GTCCGAGGTG AATATCCATA ACGCTCGCCC TTATATTCTG
TTGGCGGCGC CGCGCGCCTA TGATAGCCGC ACGTGGAGCC GCGACTCGAA ACTCGTGCCG
CGGATGGTTG CGCCGCATCT CATTGTGAAT TCGGAAGACG CTGCGGCGCT GGAGATTGCG
CCCGGCCACA TGGCGCGAAT TGAGTCTGAG TCCGGCAGCG CCGTGCTCCC GGTTCAGATC
GACCGCCATC TGCCGCGTGG CCTGGTGATC GTGCCGGATG TGGATGGCGC CCCGTTGAGT
GCATTGCAGA CGGGTCCGCT CACGCGGATC GCAATTACGG CGCATATCGA TGAGGCGGTA
GAAATGCGAT GA
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| Protein sequence | MPDVTLVIDG QTVTVPAGTN IVDAARSVGV AIPVFCYHPK LKPVGMCRMC LVEVWTPKID
PTTRQVVIGE DGKPVLALMM GKLQPGCVTP VSEGMEVRTT TQKVRFAQKG QLEFLLTSHP
LDCPVCDKGG ECPLQNLTMQ FGPSTSRFDY ADKIHFEKPI PLGDLIFLDR ERCILCSRCV
RFQDDIAGDP VLGFDNRGRA WEIISKSDPP FDSKFSGNTT DICPVGALTT ADFRFKARVW
ELRPVPSICP HCPVGCNISL DMRYDRIMRV MPRENEYVNE IWICDKGRFG MRFIESPERL
RQPLIRKGDT LTPATWDEAI TLVAEKLSAI RTHAGAAALG GLAGPDLPNE DLYLFQKLFR
QVLKSPNLDC CTGAPGEADL IDLGATLGVG KGTNLSNLGA GTAVLVVGAD PEEEAPLYVL
RLRGIVARGG DLTVINPYPT KLDRTPARVI RPRAGAEAFV ALALLKTLIE EELIAVDFVE
RRVQGLDDLK ARLRDCTVVS LCDAAGIAED DVRAAARVFA KADHGIIIYG RVALAVGADL
IDVLADLTLL TGHVGKPNNG IIPLFPGANV RGALDMGVNP GTGKKRGLKA REMWTAAREG
RLRGMIIAGM NPVRDHPAVA EALDALEFLV VQDMFLTETA QRADVVLPTA SIAGREGTFT
NAERRVQRFR QARIPEYNTP AGWDVAQRLA RALIALGITP DVPDGQGDGR AAPRAAAQTA
AATASPDHWD YVVAGDVADE IAARVRGYAD TTYESLGLTR KPQWGRQPNE AIFYDGTSYE
NTEGVGVQIA AEADNAKTMF LLRARVPSEV NIHNARPYIL LAAPRAYDSR TWSRDSKLVP
RMVAPHLIVN SEDAAALEIA PGHMARIESE SGSAVLPVQI DRHLPRGLVI VPDVDGAPLS
ALQTGPLTRI AITAHIDEAV EMR
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