| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3353 |
|---|
| Symbol | |
|---|
| ID | 5540852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4377611 |
|---|
| End bp | 4377973 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640895471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433421 |
|---|
| Protein GI | 156743292 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3877] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCC TTCTTACCAC ATGCCCGGTC TGCGGTGAGG CGTTGCATGT CACACGTATG
GAGTGCGACG CCTGCCACAC TGCAATCGAA GGGCGCTTCG CACTTGGTCG CCTGGGGCGG
TTGTCGCGCG AGCAACTGGA GTTTGTCGAG TTGCTCGTCA AAAATCGCGG CAATATCAAT
GGCGTTGCCG GCGACCTCAA AGTCGCCTAC AACACGGCGC GCAGCCGCCT CGACGACGTC
GTTGCGGCGC TTGGGTACGG ACCTCCCGCA GAAGACGCCC GTCCCGACCG GCGTGCCATT
CTCGACCGCC TGGCGGCGAA GGAGATTTCG GTCGAGGATG CGCTGCGGTT GCTGAGATCA
TAG
|
|---|
| Protein sequence | MNPLLTTCPV CGEALHVTRM ECDACHTAIE GRFALGRLGR LSREQLEFVE LLVKNRGNIN
GVAGDLKVAY NTARSRLDDV VAALGYGPPA EDARPDRRAI LDRLAAKEIS VEDALRLLRS
|
|---|
| |