Gene Rcas_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3330 
Symbol 
ID5540828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4346693 
End bp4347220 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content60% 
IMG OID640895447 
Productphosphoglycerate mutase 
Protein accessionYP_001433398 
Protein GI156743269 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACTG AACTGTTTTT GATCCGCCAC GCCGAACCGG ATCGTGCGAC TGGTCTGCCC 
TATGCCGTTT TGCCAGGACC GCCGTTGACG CTGCGCGGCG AGGAGGAAGC GGTGCAGGCG
GGGCACTGGC TGCGCGAGCG CGGTATCGAG CGGTTGCTCT CGTCACCGTT CACCCGCGCC
AGTGTTACCG CTACCACCAT TGGGCAACTC ATTGGATTGG AACCGACCCT GATCGAGACC
TTACGTGAGG TGGCGCCGGG GGAAACACAT CCAGAAGTGC GCGCCCGTAT CGCCGGGCTG
ATCGATCAAC TTGACGATAC ATCGTTGCAG CGCGTCGCGC TCGTCACTCA TGGCAGTTGC
ATTCTTGCCG CTCTCCAGCA TACAACGAAT GATCGCATCG ATTTGAGCGG GCATCGCTAC
GACTATGGGA ATCACACACC AACGGCGGGC ATCTGGCATG GAGTTCGCAC CGAACACGGC
TGGCGCTGGT CGCTGGCGTT TTATCCTGGA AGAGCCACCG AAAGTTGA
 
Protein sequence
MLTELFLIRH AEPDRATGLP YAVLPGPPLT LRGEEEAVQA GHWLRERGIE RLLSSPFTRA 
SVTATTIGQL IGLEPTLIET LREVAPGETH PEVRARIAGL IDQLDDTSLQ RVALVTHGSC
ILAALQHTTN DRIDLSGHRY DYGNHTPTAG IWHGVRTEHG WRWSLAFYPG RATES