| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3278 |
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| Symbol | |
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| ID | 5540776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4257337 |
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| End bp | 4258167 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895396 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001433347 |
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| Protein GI | 156743218 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.806697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.241519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGA CGTTGCGGAT GCGGCGGCGA CGCGATGGAA GGCGCCGGTT CGATGCGGTT
GCGCTGCTGA TAATCGTCGG ATATGCGGCG CTGGCGGTAA GTGCGCAAAC GGGGTTGAAC
GTTGTGGGGC AGGGTCTCGA TCCAGTATGG GCCGGGGTGC AGCAACGCCG CACGCTGCGG
GTGGCGGTCG ATCTTGGTTT CTACCCGTTC ACCTGGATGG AGGATGGGAA ACCTGCCGGA
TATGACATCG ATCTGGCGCA CGCGATTGCA GCGCGTCTTG GCGTTCAGGC GGAGTTCATT
CCAAGCGGGC TGGATTCGAT CTACGACGAT CTGGCGGCAC GGCGCGCCGA TATTGCGATC
TCAGCCCTGC CGTATGCGCC GGAACTCGGC TGGCGCGCCC GTTTCTCGCA GTTCTATTTC
GACGCCGGGC AGATGCTGGT TGTTCGGTCG GATTCGCCCA TCACATCAGA AGCGGACCTC
ACCGCTCACG TAGTTGGCGT GGCGCTCGGT TCCGACGCCG ATACACTGGC GCGGCGACGT
CTGATGGAGG GAGCATCGTT CGTGCTGCGT CCCGATTACG ACACGCCGGC CGATGCGCTG
GCGGCGTTGC AGCGTGGCGA GGTGGATGCC GTGATCGTCG ATCATCCGGC GGCGCTGATT
GCGATGGCGC ACGCGCCGGA ATTGCGCGTT GCGCAGGCGC TGACCTTCGA GCCATATGTG
ATCGCGGTTG CGCCGGAAGC GTATCGCCTG CACGAAGCGG TTAATCAGGC GCTCGACGCG
CTACGCGCCG AGGGGTTCTT TGAGGAGGCG CAGCAAAAAT GGTTCCGGTG A
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| Protein sequence | MRETLRMRRR RDGRRRFDAV ALLIIVGYAA LAVSAQTGLN VVGQGLDPVW AGVQQRRTLR
VAVDLGFYPF TWMEDGKPAG YDIDLAHAIA ARLGVQAEFI PSGLDSIYDD LAARRADIAI
SALPYAPELG WRARFSQFYF DAGQMLVVRS DSPITSEADL TAHVVGVALG SDADTLARRR
LMEGASFVLR PDYDTPADAL AALQRGEVDA VIVDHPAALI AMAHAPELRV AQALTFEPYV
IAVAPEAYRL HEAVNQALDA LRAEGFFEEA QQKWFR
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