Gene Rcas_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3232 
Symbol 
ID5540730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand- 
Start bp4201053 
End bp4201604 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640895353 
Producthypothetical protein 
Protein accessionYP_001433304 
Protein GI156743175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.209662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTG ACCGATTGAG CTGGCAGATC AAGAACGAAG CAACACTGGG TGAGCTGGTG 
CAGCTCATGA ATCTCAGCGC GGATGAAGCA GCCATTCTCA AATCATTGCA GGACAAAGCG 
CACCAACAGG CGCCGGCGAT GCGCGAGGAT TTCTATGAGC GGTTGCTTTC CCATCCGCAA 
ACGGCCGAGT ATTTCAGCAA TGTGAATATG AACCACATGT ACTCCATGTT GCAGAACTGG 
TTCGTTGAAC TGTTCTGCGG CGTGTACGAC GAAGCCTACG CCCGGCGTCG CATCAAGATC 
GGCGACACGC ACGTGCGGAT CGGTCTGCCG GTGCGCTATC CGCTTGCCAT GCTCGACGTT 
GCGATGGCGC ACGCCGAAAC GGTTGCGCGC GCGCACGCGC AACCCGATGC GGCTGCTACG 
GCAGTGCGCA AAGTGCTGGC GCTTGATGTC GCCGTGTTCA ACCAGGCATA CGAGGATCGC 
CAGATCCAGG CGCTTGCAGA GATGGTCGGC AACGAACGAC TAGCGCGTCG GTTGCTGTCA 
GGCGAAGCAT AA
 
Protein sequence
MSVDRLSWQI KNEATLGELV QLMNLSADEA AILKSLQDKA HQQAPAMRED FYERLLSHPQ 
TAEYFSNVNM NHMYSMLQNW FVELFCGVYD EAYARRRIKI GDTHVRIGLP VRYPLAMLDV 
AMAHAETVAR AHAQPDAAAT AVRKVLALDV AVFNQAYEDR QIQALAEMVG NERLARRLLS 
GEA