| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3224 |
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| Symbol | |
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| ID | 5540722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4194917 |
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| End bp | 4195870 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895345 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001433296 |
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| Protein GI | 156743167 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.234723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.02058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAC TTGTGTATGA TGGCAAACTG CGTCAGGTCG ACGATTATCC CCGACCAGTT
CTGCGTGCTG GCGAGGCGCT CATTCGCCCC ACGCTGGTTG GCATCTGCAA CACCGATATT
GAAATCACCC GCGGCTATAT GAACTTTCGC GGCGTGCTGG GGCACGAATT CGTTGGCGTT
GTCGTCGCTT GTGAGGACGC GGCGTGGATC GGACAGCGTG TGGTCGGCGA AATCAATGCG
GCATGCCGCG ATTGTGCCGT ATGTCGGCGC GGCGACGAGA GCCATTGCCC CAATCGCACC
ACGCTTGGCA TTGATCGGCG GGACGGCGCA ATGGCGGAAT TGTTCAGCCT GCCGATAGCC
TGTCTTCATC GGGCGCCGGA TCGTATGCCG GATGCCGTGG CAGTGTTCAC CGAACCGGTC
GCTGCCGCGC TCGAAATGCT TCAGCAAATT CATCTGCGCC CGACCGATCA GGTTGCGGTG
GTTGGTGATG GCAAACTCGG TCTGCTCTGT GTGCAGGCGG CGCGCCTTCC TGGATGCGAT
GTCACGCTGG TTGGGCGGCA TCCAGAGCGT TGGGAGTTTC TGGAGAGCAT GGCGATTCAC
GCCATCCATG TTGACGAATT GGACGCAGCG TATACCGCGC GCTTCGATGT GGTTGTCGAT
TGCACCGGTC ATCCGCACGG ATTTCGAGTG GCGCGCCGAT TGGTGCGCCC GCGCGGGTCT
CTGGTGATGA AGAGCACATT CGCAGCCGAG TCGGAGTGCA ACCTGACCAT GCTGGTGGTG
GACGAGATTC GCCTGATCGG GTCGCGTTGC GGTCCGTTTG CAGCGGCGCT GCGCGCGCTC
GACGGCGGGT TGATCGCAAC GGCGCCATTG ATCGCTGCGC GGTTTCCGCT CCACGATGGC
TTGCGCGCAT TCGCCGCCGC AGCCGGTCGG TTGAAAGTGT TGCTGGAGGT GTAG
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| Protein sequence | MHALVYDGKL RQVDDYPRPV LRAGEALIRP TLVGICNTDI EITRGYMNFR GVLGHEFVGV
VVACEDAAWI GQRVVGEINA ACRDCAVCRR GDESHCPNRT TLGIDRRDGA MAELFSLPIA
CLHRAPDRMP DAVAVFTEPV AAALEMLQQI HLRPTDQVAV VGDGKLGLLC VQAARLPGCD
VTLVGRHPER WEFLESMAIH AIHVDELDAA YTARFDVVVD CTGHPHGFRV ARRLVRPRGS
LVMKSTFAAE SECNLTMLVV DEIRLIGSRC GPFAAALRAL DGGLIATAPL IAARFPLHDG
LRAFAAAAGR LKVLLEV
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