| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3192 |
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| Symbol | |
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| ID | 5540690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4150198 |
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| End bp | 4151262 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895313 |
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| Product | DNA polymerase III, delta subunit |
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| Protein accession | YP_001433264 |
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| Protein GI | 156743135 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000207223 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0841532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTATG CGGCGGGCCG CAGATACCCA CGGGCCAGCA CCCACCTGCC TTGTGCAGGT
TCGAAACCTA TCCGTCTCAC GCCGGCGGTG GGGTTTCTTC CTGTCTCAGG TTTTGTCGTG
CTGTTCCTTG TGTATGGTCC AGACGAATAT GGGCGGAGCG AGGCGCTCGC GGCGCTCAAG
GCGCGCGTTC CGGCTGAGGT CGCCGACCTG AATATCACCA CGCTCGATGG ACGGCGGACG
ACGCTCAGCG ACATTGTGGC GGCATGCGAG GCGATGCCCT TCCTCGCCGA CCGGCGGTTG
GTCATTGTTG ACGACCTGCT GAAGCACCAG AAAGCCGGCA AGGATCGTGA CGACGTGCGC
GCATACCTGG AGCACGTGCC GGACGCCTGC GATCTTGTTT TTGTCGAAAG CGACGAGTTC
GATAAACGTA GCAGTCTCTT CACGTTTCTG AAGAAGCATG CTGAGGTGCG CGAATGCGTG
CCACGCGAAG GCGCCGATCT GCTGCGCTGG CTGAGTGACC GCGCAAAAGG TCTTGGCGTC
ACCCTCGAAC GGGATGCTGC TCAGCGGTTG ACTCTGCTGG CGGGAAATGA CAGCCGCTTG
CTGGTGACTG AACTGACCAA ACTGGCAACG TTCGTCGGGC GTCGCGGGCG TATTACTGTC
CGCGAGGTCG ATCTGCTGGT TGCCGATAGG CAGGAGCAGA ATCTGTTCTC CTTCATCGAC
GAGCTCAGTG CGCGCCGTCG GAGTGCGGCG CTGACAGCGC TGCGCCGTCT GCTCGACGAC
GGTCAGGCGG CACAGTATAT TCTGTTCATG ATGGCGCGTC AGGTGCGCAT TCTGATGGGA
GTCAGGGATC TGGCGGCACA GCGTCTGCGC CCCGACGATA TTGCGAACCG GTTGGGGCAG
AAGCCGTTCG TTGTGCGCAA AGCACTTGAG CAGGCGCACG GTTTCAGTGA TGCCGATCTA
CAGCGTTTGC ACCGGCGCCT GCTCGAACTC GATCATGCCT CAAAGACCGG TCGCGCAGCA
ATTGAAGCCG GACTGGAACT GATCGTCGCC GATATGTGTT CCTGA
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| Protein sequence | MGYAAGRRYP RASTHLPCAG SKPIRLTPAV GFLPVSGFVV LFLVYGPDEY GRSEALAALK
ARVPAEVADL NITTLDGRRT TLSDIVAACE AMPFLADRRL VIVDDLLKHQ KAGKDRDDVR
AYLEHVPDAC DLVFVESDEF DKRSSLFTFL KKHAEVRECV PREGADLLRW LSDRAKGLGV
TLERDAAQRL TLLAGNDSRL LVTELTKLAT FVGRRGRITV REVDLLVADR QEQNLFSFID
ELSARRRSAA LTALRRLLDD GQAAQYILFM MARQVRILMG VRDLAAQRLR PDDIANRLGQ
KPFVVRKALE QAHGFSDADL QRLHRRLLEL DHASKTGRAA IEAGLELIVA DMCS
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