| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3180 |
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| Symbol | |
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| ID | 5540678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4128955 |
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| End bp | 4130049 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895301 |
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| Product | peptidase M20 |
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| Protein accession | YP_001433252 |
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| Protein GI | 156743123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.689816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG CCTCAGTACA GCACGAACTG ACCCGCCTGA CCTGTAACCT GATTGCGTTC
CCTTCGACCG CCGACCATCC CGATGCACTG ATCGCCGCAA TTGATTATGT CGAGCAGTAC
GCTCGTGATT CGGGCATCCA GTTTATTCAC CGTTTCGAAG TCGAACAGAA GCCCAGCCTG
ATGATCACCC TGCGCGACAC GCAAAGGCCA GCGCTCATCC TCAACGGTCA CCTCGATGTG
GTCGCCGCGC GCGCTGAACA GTATCAACCG GTCGTGCGCG ACGGACGGAT CTACGGACGC
GGCAGCCAGG ACATGAAAGG CGCGTGCGCC GTTCTTATGC GCCTGATACG CGATCTGGCT
GCGCTTCCGG ATCCACCCGA CGTTGGGTTT ATGTTTGTCA CCGATGAAGA AATCGGCGGG
TTCCATGGCA CCAACTACCT GCTGGAACAC GGGTGGCGCT CTGCGTTCTT CATCGCTGCC
GAGCCGACCG ATCTGAACAT CTGCTATGCC GCCAAGGGCA TGGTGCGCTT CGACATCACC
TTGCACGGAC AACCGGCGCA CGGTTCGCGC CCGTGGGAAG GGGTTAATCC GATCCTTCTG
CTGCGCGACG GGTTACAGGC GCTCGAACAA CGCTTCCCAA CGCCGCGCGA AGCAGTGTGG
GCAACAACCG CCGTCCCTAC CGTGGTTCGT GGCGGTGATA CACTCAACCG CATTCCAGAG
GTGGTGACGC TTTCACTCGA CATTCGCCAC ATTCCTGAAG AAACCCCAGA CGAGATCGAG
GCGGCGGTGC GCGCCTGCTT CCCCGGCGCA ACGGTTGCGC GCAACAGCAC AGGCGGCATC
CCGCTGATGA CCGACCCCAA CGATCCGCAC CTGGCGCAGT TGGCTGCCAG CATTGAGCGC
ATCATCGGGC GTCAACCGGT CTTCTACCGT GAGCACTATG GCTCAGATGC GCGCTTCTAT
AGCGGCGCGG GCATTCCGGC AATCTGCTTT GGACCGGTGG GCGCAGGGCT GCACTCTGAT
CATGAATGGG TGGATATCGC CAGCCTGGAG CGCCTGTATC TGATCCTGCG CGATGTTGCG
ACGGCAGCCG AGTGA
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| Protein sequence | MNDASVQHEL TRLTCNLIAF PSTADHPDAL IAAIDYVEQY ARDSGIQFIH RFEVEQKPSL
MITLRDTQRP ALILNGHLDV VAARAEQYQP VVRDGRIYGR GSQDMKGACA VLMRLIRDLA
ALPDPPDVGF MFVTDEEIGG FHGTNYLLEH GWRSAFFIAA EPTDLNICYA AKGMVRFDIT
LHGQPAHGSR PWEGVNPILL LRDGLQALEQ RFPTPREAVW ATTAVPTVVR GGDTLNRIPE
VVTLSLDIRH IPEETPDEIE AAVRACFPGA TVARNSTGGI PLMTDPNDPH LAQLAASIER
IIGRQPVFYR EHYGSDARFY SGAGIPAICF GPVGAGLHSD HEWVDIASLE RLYLILRDVA
TAAE
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