| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3150 |
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| Symbol | |
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| ID | 5540648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4083451 |
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| End bp | 4086297 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895271 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433222 |
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| Protein GI | 156743093 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGGA TGGTGGCTCT TATTTCGGTA CTGACTGCTG CGCTCAAGCG TCTGCGCGCC
AATCTTGGAC TGGCACTCTG CGCATGGCTG GCGGCAGTGA TCGCTGTTGC GCTCGCGGCT
GCCGTGCCTG CATACGCCGA AGCGGCCAGT CTGCGCCTGT TGCAGGACGA AATCCGGCAG
CAGGAGCAGC GTCAGGGGCG GTCGCCATTT GCGCTGCTCC TGCGCTATAT CGGCGCTTGG
AATACGCCGC TGGAGTGGGA GCGCGTTGCG CCAGCCGACG ATTATCTGCG CCACGAAAGC
ATTCCGGGTC TCGATCTGCC GATCACCAGT TTTGCGCGTC ACGTCCGTAC TGCGCCGCTC
CGTATCTTTC TCGCGGCTGA CGGTGACGCG GTCTTCCTCA AGAATGCGCC GCTTGGCTTC
ATCAGCGGGC TTGATGACCG GATGCACATC GTCGATGGGC AGATGCCGAC GTCGTCGGCA
GATGACGCCA TGCTAGCCGT GATGATCGCC CGCGCGTTCG CCGATGAGAC GGGTGTGAAT
GTGGGTGATA CGCTCTCGAT CATTGCCCCT GGAACGCGCC CGGCGACGCT TCAGGCGCGT
GTGGCGGCGA TCTGGGCGCC GGTCAACCGC AGCGATCCGG CATGGTTCTT CCCGCCCGAT
ACCCTCAACG ATCTCATTCT TGTGCCGGAG GCGAGTTTCA CCGATCCTGT CGCCGGAACA
TTGCGCAACG AGGTCGATCA GGCGCTCTGG TTTGTGCGGT TGAGCGGTGA AGGCGTCACC
GGCGCGCAGG TGTCGCCGCT TCTGAGTCGT GTCGAAAGTG TACGGGCGCG TGTCAACAGT
CTCATTCCCG GGTTGCGCCT CGAACAGGGA CCGGCGGAGG CGCTGCGACG ATACCAGGAT
CGGGTGGCAT CGTTGACGAC CCAACTCTTC GTGTTCAGCG CGCCGATCCT CGCGCTGACG
CTCTATTTTG CGACGCTGGT CGCCGCCCTG CTTGTGCGGC GGCAGAGCAG TGAGATTGCG
CTCATGAAGT CGCGTGGTGT CCGCAGCGCG CAGATTCTGG GCATGTATCT GGTTGAGTGG
GTGATCATCG GTGGAGTGGC GCTTGCTGCG GGATTGCCGC TTGGGCTTGC TTTTGCGTCG
GTGATGAGCC GGGTACGCTC ATTTCTTGAG GTCGATCTGT CCGGCGCTGG TGTGCCGCTC
TCGCCTGGCG CGCAGAGCCT GACGTTTGCT CTGGTCGTCC TGGTGATCAC CGTGGGGGCA
TCGTTGACTC CGGCGTTCGT GGCGACACGC CGTACCCTGG TGGACGAGCA GCAACAGGCG
GCGCGCGCCG CGCGTCCCCC GCTCTGGCAG CGCGCCTATC TCGATCTGCT GCTCCTGATC
CCGGCGGCAT ACGGCGTCTA TCAGTTGCAG ATCGGCGGTG GCCTGTTTCA GGGGAATGCC
GATCCGTTCA GTAATCCGCT GCTGGTGCTG ACCCCGGCGC TTCTCTGTTT TGCGCTTGGT
CTACTGGCGC TGCGCCTCAT TCCGCTGATT CTGGAAGGGT TGGCGAGGTT GGCGGCGCTT
CCGGCGTGGA TTGCGCCACT GGTCACGCTC CGCGCGCTAG CGCGGCAGAC CGACAATTAT
CGCGGCGCGT TGCTCCTCCT CATCCTGACG CTCAGCCTGG CAACGTACAG TGCTACGATG
GCGGATACGC TCGATGGCGC GATGCGAACC GAATTGACGT ATCAGGTTGG CGCAATGACA
CAACTCTTCG AGACGGGCGA GAGCGCCGGA CAGGCGCGTC CCGGTCAGCC CGGCAGCCCG
CCACAACAAC CGCGCCCTGA TATTCGTGAA GAAGCGCGCT TCCTGTTCGT TCCGGTGAGT
GAGCATCTTC AGGCGCCGGG TGTGCAGGCG GCTGCGCGTG TCGGACGCTA CGAGGCGTTC
GTGAGCGTCG GTGCGGGCAG CCGGCAGGCG CAGGTGATCG GCATTGATCG GACGGATTTT
CCGAAGGTGA TCACCCGGTT CGACCGCGCC TGGGGTGGCG GTGAATCGTT GGGTGGGCTG
ATGAACCTGC TGGCGCGTTA CCCGAACGGT GCGCTCGTCA GCCGTGACCT CTTGGGCGAT
GGTCTGCGGA TCGGCGATGC GTTGCCTGCC ACGTTGCGAC TCTACGGTGA TCAGCGTGAG
GTGCGCTTTC GCATTGTCGC CGCCATTGAC CTCTGGCCCG GCGTCTATCC GCAGGATGGA
CCAATCATCG TCGCCAACTT GAACTATATC TTCGACGAGA TGGGGGGACA GTACCCATAT
GATGTCTGGA TCACTCGCAA CCAGGCAGTT CCTATCGACG AGGTGGTTGC CGGAGTGCGT
GGGCAGGGCA TTCCGGTCAT CGATGTACTC GATGTGGCAA CCCTCATCGC GCGCGAACAG
TCCCGTCCAC AGCGCCAGGG GTTGTTTGGT GTATTGACTA TCGGTTTTCT GACGGCCGGC
GTATTGACGC TGCTCGGCTT TCTGGTCGCC GGGTTCATCA CTGCGCGCCG TCGTGCAATC
GAACTGGGCA TGCTGCGGGC GCTGGGATTG AGTGAATCTG GTGTTGCGGC GGCGCTGCTG
CTGGAACAAC TGCTGTTGAT CGGCGCTGGA TTGGCAGCTG GCAGCGGAAT TGGCGCGCTG
GCGGCGCTGC TGATCGTACC CTTCATGCAG GTCGGTGTTG GTCCATATCC CGGTGTTCCC
GCTTACCCAC CGCGCCTGGC ATGGGAGAGT ATGGCAGGCA TTTATGCGGC ATTTGGCGCG
ACGCTAACGC TCTCACTCCT GGCGCTCGGC GCGTCACTGG CGCGTGTCCG GTTGTTCCAG
GCGGTGAAAT TAGGGGATGC GAACTGA
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| Protein sequence | MRRMVALISV LTAALKRLRA NLGLALCAWL AAVIAVALAA AVPAYAEAAS LRLLQDEIRQ
QEQRQGRSPF ALLLRYIGAW NTPLEWERVA PADDYLRHES IPGLDLPITS FARHVRTAPL
RIFLAADGDA VFLKNAPLGF ISGLDDRMHI VDGQMPTSSA DDAMLAVMIA RAFADETGVN
VGDTLSIIAP GTRPATLQAR VAAIWAPVNR SDPAWFFPPD TLNDLILVPE ASFTDPVAGT
LRNEVDQALW FVRLSGEGVT GAQVSPLLSR VESVRARVNS LIPGLRLEQG PAEALRRYQD
RVASLTTQLF VFSAPILALT LYFATLVAAL LVRRQSSEIA LMKSRGVRSA QILGMYLVEW
VIIGGVALAA GLPLGLAFAS VMSRVRSFLE VDLSGAGVPL SPGAQSLTFA LVVLVITVGA
SLTPAFVATR RTLVDEQQQA ARAARPPLWQ RAYLDLLLLI PAAYGVYQLQ IGGGLFQGNA
DPFSNPLLVL TPALLCFALG LLALRLIPLI LEGLARLAAL PAWIAPLVTL RALARQTDNY
RGALLLLILT LSLATYSATM ADTLDGAMRT ELTYQVGAMT QLFETGESAG QARPGQPGSP
PQQPRPDIRE EARFLFVPVS EHLQAPGVQA AARVGRYEAF VSVGAGSRQA QVIGIDRTDF
PKVITRFDRA WGGGESLGGL MNLLARYPNG ALVSRDLLGD GLRIGDALPA TLRLYGDQRE
VRFRIVAAID LWPGVYPQDG PIIVANLNYI FDEMGGQYPY DVWITRNQAV PIDEVVAGVR
GQGIPVIDVL DVATLIAREQ SRPQRQGLFG VLTIGFLTAG VLTLLGFLVA GFITARRRAI
ELGMLRALGL SESGVAAALL LEQLLLIGAG LAAGSGIGAL AALLIVPFMQ VGVGPYPGVP
AYPPRLAWES MAGIYAAFGA TLTLSLLALG ASLARVRLFQ AVKLGDAN
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