| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3116 |
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| Symbol | |
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| ID | 5540612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4034874 |
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| End bp | 4036418 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895235 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433188 |
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| Protein GI | 156743059 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0200817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCCG CCAACCAGCC ACCCGATAAG TCGCCAGCGC CGATGCTGCC GTTTCGTATC
TCGCGCGATA CTATCATCCT GCTGGCGGCG CTTCTCTTTC TGGCGTTCGC CATTCTGCTG
GCGGTGCTGT TTCCGCCGTC GGGAAGCGAA TTGGCGCGCG CCCGGACGCC TGCACCCACC
CTGGTGCAAA TGACCGTCGC CGTGGTGGAA CCGGTTTCCA CCTCAACCCC GGCGCCCACC
ATGTTGCCGA CCGTCGCGGC GCTGCCGCCA ACCGATACGC CGCCGTATCC GCCGCCGCAG
AATATCGCAC CGGGTCTCGC AGCGCCATCG CCAACACTCG ATCTTCCGCT GCCAACCGCA
GCCCCCGACG TCGCCGGAGC CGCACCGACG CCGGCGCTTG CCCAGGCGCC AACCCTGGAA
CCAACGCTTG CCCCTCCTCC TGTGGTGCAA CCAACGCCGG AGCAGCCGAC TGCCGTCCAA
CCAACACCGG AACCGTCGCC CGTCGTTGTT CAGCCAACGC AGCCGCCAGC GCCCCGCCCC
ACGCGCCCTC CACCGACGGC GACGCCAATC CCGATCGATA TCATCCGCAG CACCACCTAT
TGGACAATCG CCCAAAGCCC GATCATTCTA CGACGCGACA CGGTGGTTGC AGCCGGCGCC
GGGTTGATTA TCGAGCCGGG GGTTGAGGTG CGCATTCCTC CTGGAGTCAC CCTCTATGTT
GATGGTCGCC TGTACGCCCT TGGGCAGGCG GATCGACCGG TGCGCTTCAG CGGCGCCGCT
CTGCCGCGCT GGGAAGGAAT CGTCGGGCAA CCTGGCAGCG ACATCGTGCT GGAACACGTC
GACGTGCGCG GCGGCGGCGC GGGCGGGACG GTCATTTCGT CAGAGCGGGG ATCATTGACG
ATCCGTTCGA GCCGTATCAC CGACAACGGC GGTCATGTGC GCATCGCCGG CGGTCGCTTC
GAACTGCGCG ACAGTGAGAT CGCGGGAAAT GACATGCCAT ATGGCGCAGC AGTTGAGATC
ATTTACGAAA GCGGCGGTAG CGTCACGCTG GTAGGGAACC GTATCGGCGG CAATCGAATG
GCATTTGGCG CCCCCAACGT CCGCATTGAC AGCCGCAGCC CCAACGATAC CGTGACGCTC
GATATTCAGG GCAATCTCCT CGTTGGTCAG GACGGACCAA ATCTCGCGCT GGAGACGAAT
GGACCATTGC AGGGCATCGT GCAGTGCAAC GGGTTCATTG GCGGCTCGAA TGGTCTGAGT
GTCCTCAGCA CCCTGCCGCA GGCGCCTGGT CTCCCATTGT TGACCATTCG GAACAACGCG
ATTGAGAAAC ACACGCCGCC GATCATTCCG ATCTACCTGG AGCGCGGCAT TGGGCGTGGC
GCCACCAGCG ACGTGCTCAT CGACATGCGT TCCAACTGGT GGGGGGCTGC CGAAGGACCG
TATGAACCGG ATCGCCATGC CGACGGTCGC GGTGATGCGC CGGGCGATCT GGTGCAGTTT
GACCCCTGGC TTACCGAACG ACCCGCCTGC GCTCCCGCAC AATGA
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| Protein sequence | MDPANQPPDK SPAPMLPFRI SRDTIILLAA LLFLAFAILL AVLFPPSGSE LARARTPAPT
LVQMTVAVVE PVSTSTPAPT MLPTVAALPP TDTPPYPPPQ NIAPGLAAPS PTLDLPLPTA
APDVAGAAPT PALAQAPTLE PTLAPPPVVQ PTPEQPTAVQ PTPEPSPVVV QPTQPPAPRP
TRPPPTATPI PIDIIRSTTY WTIAQSPIIL RRDTVVAAGA GLIIEPGVEV RIPPGVTLYV
DGRLYALGQA DRPVRFSGAA LPRWEGIVGQ PGSDIVLEHV DVRGGGAGGT VISSERGSLT
IRSSRITDNG GHVRIAGGRF ELRDSEIAGN DMPYGAAVEI IYESGGSVTL VGNRIGGNRM
AFGAPNVRID SRSPNDTVTL DIQGNLLVGQ DGPNLALETN GPLQGIVQCN GFIGGSNGLS
VLSTLPQAPG LPLLTIRNNA IEKHTPPIIP IYLERGIGRG ATSDVLIDMR SNWWGAAEGP
YEPDRHADGR GDAPGDLVQF DPWLTERPAC APAQ
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