Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3095 |
Symbol | |
ID | 5540591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4012316 |
End bp | 4013278 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895214 |
Product | glycosyl transferase family protein |
Protein accession | YP_001433167 |
Protein GI | 156743038 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.23695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGAA TTGTTCGTAA TGACAATCCG CGCGTCAGTA TCGGTCTTCC GGTTTACAAT GGGCAGCATT ATCTTCGCCA GGCGCTGGAT TCGTTGTTGA GTCAGACATT TCACGATTTT GAGGTGATCA TTTCCGATAA CGCCTCGGAC GACGCAACGC CTGAGATTTG TCGTAAATAT GCGGCGCATG ACGCGCGCAT CCGGTATGTG CGCCACGATG TCAATCGCGG CGCTTCATGG AACTTCAATT ACGTGTTTGG ATTGGCGCGT GGCGTCTATT TCAAGTGGCA TGCTCACGAC GACATGCTCG AGCCGACATT TCTCGAACGG TGTGTGGCGG CGCTTGATCA CAGTCCGCGG GTTGTGCTCG CCTTCAGTCG CACGCGCGTT GTCGATCCTG ACGGCAACAC GCTGTACACC TATGACGAGC GGTTGCGCAC CGACTCACCA CGTGCGAGTA TTCGTTTCCA CGATCTGATC TGTGTCGGGC ATCCCTGTTT TCAGGTGTTT GGGGTCATTC GCGCAGATGT GCTCCGACGC ACGCCGCTGA TCGGCGCCTA TGTGCCGTCG GACCGCATTC TGCTGGCGCG GTTGGGATTG TTGGGCGCCT TCTACGAAGC GCCTGAGCAT CTGTTCATTT CGCGACGGCA TCCGACGCAG TCGGTGCGCG CGGCGAAACT GCGCGCCCGC GCCGCCTGGT TCGACCCGGC AAACGAGGGG AAAATCGTGA TGCCTCATTT CCGCACGTTG TACGAATATA TCAAAGCCAT TCGTGAAACG CCGCTTCCAC CCGACGAGGC GCGCCGCTGC TATGGTGCGC TGCTGCACTG GATCGCCGCT GATCTGAATT GGGCACGGTT GGGCAACGAC GTTGTCCATG CGGCGCGCCA GTTGAGCAGA CGCGCATTGC GGCGCATTCG CGCGTTGAAT TCTACGACAA TCGCACGGAG GAACTCGCTA TGA
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Protein sequence | MTRIVRNDNP RVSIGLPVYN GQHYLRQALD SLLSQTFHDF EVIISDNASD DATPEICRKY AAHDARIRYV RHDVNRGASW NFNYVFGLAR GVYFKWHAHD DMLEPTFLER CVAALDHSPR VVLAFSRTRV VDPDGNTLYT YDERLRTDSP RASIRFHDLI CVGHPCFQVF GVIRADVLRR TPLIGAYVPS DRILLARLGL LGAFYEAPEH LFISRRHPTQ SVRAAKLRAR AAWFDPANEG KIVMPHFRTL YEYIKAIRET PLPPDEARRC YGALLHWIAA DLNWARLGND VVHAARQLSR RALRRIRALN STTIARRNSL
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