| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3091 |
|---|
| Symbol | |
|---|
| ID | 5540587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4007782 |
|---|
| End bp | 4009002 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640895210 |
|---|
| Product | C-methyltransferase |
|---|
| Protein accession | YP_001433163 |
|---|
| Protein GI | 156743034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAA TAATGTGTCC CGCGTGTGGG TCTGCGGGAA TGGACGTTTT CTACGAATTG
GAGCGCGTTC CGGCGCATAG CGTTCTCCTG CTCGCCACGC GCGAAGAGGC GGTCAATTAT
CCGCGTGGCG ATATTCGCCT CGGTTTTTGC CGCTCGTGCG GGTTTATCAG CAATACTGCC
TTTGATCCGT CGCTTCACGA ATATTCGGAG CGCTACGAGG AAACACAGGG GTATTCGCCG
ACATTCAATG CGTTTGCGCG CAGACTGGCG GAATATCTGG TCGAACGGTA TGATCTGCGC
GGCAAAGATA TTCTCGAAAT CGGGTGCGGC AAGGGTGAAT TTATTACGCT GCTCTGCGAG
TTGGGCGAAA ATCGCGGTGT GGGCATCGAT CCGGCATATG TTGCGGAGCG GAGCCTGGCG
CATCCTGCTG ACCGCGTGAC GTTCATTACC GATTTCTATT CCGAGCAGTA TGCGCACCTC
CGCGCGGATT TCGTCGTCTG TAAGATGACG CTGGAGCATA TCCACCATAC GGCGGCGTTT
GTCGGCATGG TGCGACGCGC GCTCGCCGAT CAACCGCAGA CGACCGTTTT CTTTCAGATA
CCCGATACAA CGCGTGTGTT GGAAGAGATC GGGTTTTGGG ATATTTACTA CGAGCATTGT
TCCTACTTCA CACCCGGTTC GCTGGCGCGC CTCTTCCGAC GCTGCGGTTT TGACGTGATC
GATCTATGGC GCGATTATGG CGATCAGTAT CTGATGATCG AAGCACAGCC GGGAAGCGGG
ATGGGTCGCG CGTTTCCAGC CCTGGAACAC GATCTGGAAC GGACCGCTGC CGATGTTGAG
ACGTTTCGAC GCGAAGCGCC GCAGGTCTTG CAGCGCTGGC GGGAGTATCT GGCGCAGCAG
CATGCCGCTG GACGCAGGGT GGTGTTGTGG GGGTCGGGGT CGAAAGGGGT TGCGTTCCTG
ACGACGCTGG GCATCGAACG GGAGATTACC TATACCGTTG ATATAAACCC GAACAAGCAC
GGGACGTTCA TGGCGGGAAC CGGTCAACAG ATCGTCGGTC CGGCGTTTTT GCGCGACTAT
CAGCCCGATG TGGTCATTGT AATGAACCCG ATCTACCGCG ATGAGATTCA GCGTGATTTG
ACGACGCTCG GCGTGACGGC GGACGTGTTG AGCGTGGAGA TGTTCGGTCG CGCGGCATCG
GCGCTTGTGG GGTGTGCGTG A
|
|---|
| Protein sequence | MQSIMCPACG SAGMDVFYEL ERVPAHSVLL LATREEAVNY PRGDIRLGFC RSCGFISNTA
FDPSLHEYSE RYEETQGYSP TFNAFARRLA EYLVERYDLR GKDILEIGCG KGEFITLLCE
LGENRGVGID PAYVAERSLA HPADRVTFIT DFYSEQYAHL RADFVVCKMT LEHIHHTAAF
VGMVRRALAD QPQTTVFFQI PDTTRVLEEI GFWDIYYEHC SYFTPGSLAR LFRRCGFDVI
DLWRDYGDQY LMIEAQPGSG MGRAFPALEH DLERTAADVE TFRREAPQVL QRWREYLAQQ
HAAGRRVVLW GSGSKGVAFL TTLGIEREIT YTVDINPNKH GTFMAGTGQQ IVGPAFLRDY
QPDVVIVMNP IYRDEIQRDL TTLGVTADVL SVEMFGRAAS ALVGCA
|
|---|
| |