| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3071 |
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| Symbol | |
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| ID | 5540567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3977313 |
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| End bp | 3977975 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895190 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001433143 |
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| Protein GI | 156743014 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTGC TGATTGTCGG CGGCGGTAAA ATTGGGCGTA ATCTGGCGAT GTTCCTGAAT
GTCGAGGGAC GTCATTCAAT CACGCTGGTG GAAAAGCAGG AGCAGGTGGC GCATGCTCTG
ATGCGCATTC TGCCGGATAT TCGGGTGATC GAGGGGGATG GGTGCGATCC CTCGGTGCTG
CGCGAAGCAG GCGCAGAATT CGCTGATGCA GTCGCTGCCG TTACCGGCGA TGACGAGGAC
AACCTGGTGA TTGCGGTGCT GTGCAAACGT GAGTTCCGTG TCGGTCGTGT TGCTGCGCGC
ATCAACAATC CGAAGAATGC CTGGCTGTTC ACCCGACGCA TGGGAGTCGA TCTGCCGATC
GATACGGCGC AGACGATTGG GCGCGGGTTG GAAGCCGACA TTAACCTTGG CGCGATTGTG
CAATTGACGC GCCTGCGCGA AGGGCGAATC TCGCTGATTG AATTTACGGT CTCACCAGAG
TCGAGTGCGG TGGGAAAGAC GGTCGCTGCG CTGCGTCTTC CGCCCGATTG TCTGTTGACA
GCCATCCTGC GCGGTGACGA TGTTATTCTG CCATCGGGGG AAACAGTCAT TCAGGCGGGC
GATCAGGTGA TTGCACTCGC ATACCGCGAC CGCGAGGCAT CGCTCTCGGA GCGATTCCAG
TAG
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| Protein sequence | MNVLIVGGGK IGRNLAMFLN VEGRHSITLV EKQEQVAHAL MRILPDIRVI EGDGCDPSVL
REAGAEFADA VAAVTGDDED NLVIAVLCKR EFRVGRVAAR INNPKNAWLF TRRMGVDLPI
DTAQTIGRGL EADINLGAIV QLTRLREGRI SLIEFTVSPE SSAVGKTVAA LRLPPDCLLT
AILRGDDVIL PSGETVIQAG DQVIALAYRD REASLSERFQ
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