| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3046 |
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| Symbol | |
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| ID | 5540542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3948870 |
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| End bp | 3950357 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640895165 |
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| Product | heat shock protein DnaJ domain-containing protein |
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| Protein accession | YP_001433118 |
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| Protein GI | 156742989 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.742448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTG AACAGACGTG TCCCTCATGC AGCGCGACGC TGGGTTCTGA TGGGATTTGC
CCGGCATGTG GTTCGGTGAC GCGCGGCTTT TTTCGCAGTC TCAACCTGGG CGCGCCACAG
GTGGCGGCTG CTGTCGCGCA GGGGCTTGAC CTCTACCGGT TGCTCGGCGT CGATCAGCAC
GCCGATGCAA TCACGATTGC GCGCCAGTAT CGTCGGTTGC GCGCGCTCTT TCCCGATGAC
CCGTCTGCGC TGGCGGCAGA GCCGAGGCGC AAGTTCGAAT TGCTTCAGGT TGCCGGGCGC
ATCTTGACCG ATCCCTCGCT GCGGGCGCTC TATAACGAAC TGCGGGTATC GGCTGCCGCC
GGCATTCAGC AAGGCGTGGT GCGCTGTGAG TCGTGCGGCG CTCCGCTGCA AGGCAATGAG
CCGCGCTGCC GCTACTGTGG TTCGCTGCGT CCGGGAGAAC CGGCGCCGCC AGCCACGCCG
CCCGACGCCG GACCACCGGT TGCGGAGCCG GTTGATTTTT ATGCCCTGCT GGGACTCTCA
CCCGCGCATC TGATGATCAA TCCGGGTGCT CGTCGCTCGG CGCGTCCGGC GCTGGATGCC
GCAGAGATGT TGCACGAATC ACGACCGCCG ACGCCGGAAG AGGTCGATGC CGCTTCCTAC
GCCTTTCAGC AGCGGACGCT CCTCCATCCT GGTTGGTCTG CCGCAGAACG TGAGGCGCGG
GTAGAGAATC TGGAGATTGC CCGGCGCATT CTGCGGAACG AACGACTCCG CAATCGTTAC
GATGCCTTCT GGCTGGCATT CCGTCAGGGT CGGTTCGACC ACGGTCACCT CGAAGGGTTG
CGCGCGCTGA TCGATGAAGT GCGCGCAGAT GAAACGACGC CCTCGACACT TTCAGTGGAA
GAGGCGGAAG CGCTGTTTCA ACAGGGTCGC GGGTTGCTTA CTGCCGGATT GCCGCGCGAA
GCGCTCGATC CGTTGCGCCG GGCGCGTGAG GCGCTGCCGC ATTCCGCAGA GGCGCACGCA
TGGTATGCCC GCGCCATCCT TGCGTCTGCC GACCCGCTCG ATCTCGGCGG ACACGCGCTG
CGTCAGGCGC TGGTGGCTCT CGAAACCGCC GCTCGTTCTA GTGCGCCGCT TCCCGATAGT
GAGTCGTACC TTGCTCTGTG TCGCGGGTTG CTGGCGCGTG ACGCAGGAGA TGCGCGCCAG
GCGGAAATCG AATTGTTGCG CGCCGCACAA CAGAACCCCT CGCTGGCGCA CGCCTGGTGC
GGATTGGCGG CTCTTGCGCT GGCGCGCGGG GCGAACGGCG ATGCTATCGA CCACTGCCAT
CGGGCGCTGG CGATTGACCC GCGCGATGAG CGCGCCTGGT TGATGTTGGC AGGCGCCTGC
CTGCGCACTC GACGCCATGC CGAGGCGCGC GCGGCGGCAG AGCGGGTTGC CGCGTTGCGC
AGCGATGGTG TGAGCGCCGA GAAGATACTG TCCGAAATCG CAAACTGA
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| Protein sequence | MTLEQTCPSC SATLGSDGIC PACGSVTRGF FRSLNLGAPQ VAAAVAQGLD LYRLLGVDQH
ADAITIARQY RRLRALFPDD PSALAAEPRR KFELLQVAGR ILTDPSLRAL YNELRVSAAA
GIQQGVVRCE SCGAPLQGNE PRCRYCGSLR PGEPAPPATP PDAGPPVAEP VDFYALLGLS
PAHLMINPGA RRSARPALDA AEMLHESRPP TPEEVDAASY AFQQRTLLHP GWSAAEREAR
VENLEIARRI LRNERLRNRY DAFWLAFRQG RFDHGHLEGL RALIDEVRAD ETTPSTLSVE
EAEALFQQGR GLLTAGLPRE ALDPLRRARE ALPHSAEAHA WYARAILASA DPLDLGGHAL
RQALVALETA ARSSAPLPDS ESYLALCRGL LARDAGDARQ AEIELLRAAQ QNPSLAHAWC
GLAALALARG ANGDAIDHCH RALAIDPRDE RAWLMLAGAC LRTRRHAEAR AAAERVAALR
SDGVSAEKIL SEIAN
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