Gene Rcas_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3034 
Symbol 
ID5540530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3932686 
End bp3933771 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content60% 
IMG OID640895154 
Producthypothetical protein 
Protein accessionYP_001433107 
Protein GI156742978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCC ACGACATCCG TTTACTTCAG GCGATGCGCC ACTATCCGTC GGTGACGATC 
ACGCTGCCGA CGCATCGCAC ATCACCCGAT AACAAGCAGG ACCCGATCCG GGTGAAGAAT
CTGGTGACCG ACGCAACCAA CCGGCTACTC GGTGAGTTCT CGCGGCGCGA TGTCGAACCG
CTCCTCTCCC GGCTCGATGC GCTGGTCAAT GATATCGATT ACCGCTACAC GCTGGATGGA
CTGGCGCTAT TTGTCAATCG CGACATCGGG CGCATGTTCA TCCTGCCGTT TACCCTGCCG
GAACGGGTGG TCGTTGACGA GACATTCTGG ACACGCGGGC TGGTCTTTGC GCTCAATCGC
ACCCTGCGGT ATTGGGTGCT GGCGCTCAGT GAGCAGCCGA CGCGTCTGTT CGAGGGGGTT
CGTGAGCATC TCCAGGAAAT GACCAACGAA GGATTCCCGA TGACCCACAC CGGTCCAGGC
GGCGAGCGCG GTCTGCCCAA CGACCCGGCG ATCAACCGGT CGGCATACCG CGATGAACGC
CATCGCCAGT TCTTCCGCCA GGTCAGCGCT GCGCTGACGC CGTTCATCAC CGATGACCCG
TTGCCGCTGG CGCTGGTTGG CGTGGATCGC TATCTCGCCT TCTTCCGTGA AGTCTCGCCA
CATGCCGGCG CGGTTGTGAC CACGCTGACC GGTAATCACG ACAAAACACC CACCCACGAA
CTCGGCAAAC TGGTGTGGCC CCTGGTCGAG CAGAACCTCG CCATCCGCCG CACCGAGGCG
TTGAAGGAAT TGGACGCTGC GATTAGCGCG CAAAAGTACG CCTCGACCCT TGGTGAAGTC
TGGCGCTTTG CACACGAAGG TCGCGTGGAT GTGCTCCTTG TCGAAGAAGA CTACCATCAA
GCGGTGCGGG TGGCCGATGA CGGCATGACG CTGACACCGG TCGATGATCC AACGCTTCCG
GATGTCGTCG AGGATGCCGT GGATGAGATC ATCGCCGTGG TGCTCGAGAA CAATGGTCGC
GTGGTATTTG TCAACAATGG CGCGCTGCCA CAGCATCAGC GGATCGCAAC CATCCTGCGC
TATTGA
 
Protein sequence
MNRHDIRLLQ AMRHYPSVTI TLPTHRTSPD NKQDPIRVKN LVTDATNRLL GEFSRRDVEP 
LLSRLDALVN DIDYRYTLDG LALFVNRDIG RMFILPFTLP ERVVVDETFW TRGLVFALNR
TLRYWVLALS EQPTRLFEGV REHLQEMTNE GFPMTHTGPG GERGLPNDPA INRSAYRDER
HRQFFRQVSA ALTPFITDDP LPLALVGVDR YLAFFREVSP HAGAVVTTLT GNHDKTPTHE
LGKLVWPLVE QNLAIRRTEA LKELDAAISA QKYASTLGEV WRFAHEGRVD VLLVEEDYHQ
AVRVADDGMT LTPVDDPTLP DVVEDAVDEI IAVVLENNGR VVFVNNGALP QHQRIATILR
Y