Gene Rcas_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3015 
Symbol 
ID5540511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3910731 
End bp3911159 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content55% 
IMG OID640895135 
ProductDNA polymerase beta subunit 
Protein accessionYP_001433088 
Protein GI156742959 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.914629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA TTGAAAAAGT TCGCGACCTG CTCGCTGCTC ACGATGCCAT CGAGTTTGCC 
CTCCTATTCG GTTCCTTTGC GCGGGGAAAG CCGAAACCGT GGAGCGATGT GGATATTGCA
ATTTTTGTCG AGCGGCCCCT TGACCTCTTG GAGATCGGGC AGCTTACGGC AACGCTCGAG
TGCAGCCTCG GTCGGACAGT GGATGTGCTT ATCTTGAACA CGGCGCTCGA ACACCATCCT
GCCCTCGCCT ACAACGTCAT TGCCGAAGGC TGCTTGCTGT TCTGTCGCCG ACGGGAAGCC
TTTGTAGATT GTAAAACCAA AATTATTTTG CGCTATCTCG ATACGGCGTT CCTGCGGTCA
ATGGTTGCAC GCGCCTTTGA AGAGCGTCTG AACACCGGTC GCTTCGGCGC AGGAGAGACC
CATGCGTGA
 
Protein sequence
MIAIEKVRDL LAAHDAIEFA LLFGSFARGK PKPWSDVDIA IFVERPLDLL EIGQLTATLE 
CSLGRTVDVL ILNTALEHHP ALAYNVIAEG CLLFCRRREA FVDCKTKIIL RYLDTAFLRS
MVARAFEERL NTGRFGAGET HA