| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3009 |
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| Symbol | |
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| ID | 5540505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3905253 |
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| End bp | 3906158 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895131 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001433084 |
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| Protein GI | 156742955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.332764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAT TACAGTCAAT CACCACTCAT ACTGCGTATA TTCCGGGCGC CAACAATCTG
GGCATCATTC TGACCGGCGA CGGAGGCGCG ATCGCGGTCG ATACCGGTCT CGACAAAGAT
ACCGGTCGCA TGCTGCGGCG CGCGCTCGAG GAAGCAGGTC TTCGGCTGCG GGCGATCATC
AGCACCCATC ACCACGCCGA TCATATCGGC GGCAACGATT ATCTGGTGCG CAATCTTCCT
GATGTTGCCG TATATGCGCC ACGGCTTGAA GCGCCCTTCA TTGAAAATCC GCTTCTCGAA
CCGATCTACC TGGCGCTTGG CGCCAGCCCG CCAGCCGCGC TCCGCACCAA ATGGCTGATG
GCAAAGGGCG TTCCGGTTGA TCACCTGATC GACAGCAACG AGGTGGACAT TGCTGGAGTA
ACGCTGGAGA TCATCGCATT ATCGGGGCAT AGCCTGGGGC AGATTGGCGT GGCGTTCGAC
GGCGTCTGTT TTGCGGCTGA TGGGTTTTTT GGACCTGACG TGCTGGCGAA GCACGGCATT
CCATATGCGC ACGATGTCGC TGCGCAGATC GCGTCGCTCG AACGGTTGGC GGCGCGAGGT
GAGCGGTTCT TCCTTCCCGG TCATGGTGAG TTGACGCTGC GCAGCGATCT GGAGGCGACG
CTGCGCGCGA ACCGCGATGC TGTTGAACGC GCGCTGTCTG CTGTGGGTGA TGCACTCGCC
GAACCTGGTG ATACCTTTGC GGTGGCGCGT CGGGTTCAGA AGGCGCTGGG ACTGACCATT
GCCGGGTTGC CTCAGTATGC GATTTTTGTC TCAGCGGTGG CGGCACACCT TGCGTACCTC
GAGATACATG GCGACGCAAC GCTGAGCGTA ACCGACCAGG GCGCAGTGTG GCGCAACACG
TCATGA
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| Protein sequence | MPLLQSITTH TAYIPGANNL GIILTGDGGA IAVDTGLDKD TGRMLRRALE EAGLRLRAII
STHHHADHIG GNDYLVRNLP DVAVYAPRLE APFIENPLLE PIYLALGASP PAALRTKWLM
AKGVPVDHLI DSNEVDIAGV TLEIIALSGH SLGQIGVAFD GVCFAADGFF GPDVLAKHGI
PYAHDVAAQI ASLERLAARG ERFFLPGHGE LTLRSDLEAT LRANRDAVER ALSAVGDALA
EPGDTFAVAR RVQKALGLTI AGLPQYAIFV SAVAAHLAYL EIHGDATLSV TDQGAVWRNT
S
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