| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2995 |
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| Symbol | |
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| ID | 5540491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3889951 |
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| End bp | 3890433 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895117 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001433070 |
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| Protein GI | 156742941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0325839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0185812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG GTTCAAGCAG ATCATTGGAT CGACGCTGGT GGACTGCTGG ATTGATTGCA
TCCACAGCGC TTTTGTGCGT GTGGTGTGGG GTATTTGCCG GTATCGGCGG TTGGGTTGCC
GGGCGTGATA TTGGTCGGCG CGAGGCGCGC CTCGAACTGA GTGCAACCGC TGCCGCACAA
CCGGTTCTGC CGGATCTTGG GGTGCTGGTG ACACGCCTGG ATCGTAGCGG TCCGGCTGCG
CGCGCTGGCG TCGCACGCGG CGACGTGATC GTGGCGATTG AAGGGGTGTA TGTCCAGGAC
GCGCGTGATC TGCGGAATGA GATTCTGCGC TACCGTGTGG GCGATACGAT TCGCCTGACG
ATTCTCCGTG ACCAGAGTGA GCAGACCATG AACGTTGTGC TTGGCGCCTT CCCTGGTAAT
CCGCGGCTGC CGTATCTTGG CGTGTACTAC ACTGCCCGCG GTGAGGAACC GGCTGATCTA
TGA
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| Protein sequence | MTEGSSRSLD RRWWTAGLIA STALLCVWCG VFAGIGGWVA GRDIGRREAR LELSATAAAQ
PVLPDLGVLV TRLDRSGPAA RAGVARGDVI VAIEGVYVQD ARDLRNEILR YRVGDTIRLT
ILRDQSEQTM NVVLGAFPGN PRLPYLGVYY TARGEEPADL
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