| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2993 |
|---|
| Symbol | |
|---|
| ID | 5540485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3881709 |
|---|
| End bp | 3882761 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895111 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001433068 |
|---|
| Protein GI | 156742939 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.021793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCAA TGTTCGATAT CGAATGTGAT ACGCTCGAAG GGCTGGAACC CTATGCCCTC
GAAGAGATTC GAGAGCGTTT CGGGCGCCGC TGTACATCCA TTGTGTTGCG TTCGGGCAGA
ATACGCATGG TGTATACGGG GGAACTCCAG GCGTTGCTCC GCTTGCGTTC GGTTTTGGCG
GCGTATCTGG TCGTCACCTT CGATGTGCCG CGCCCGCGTG CCCTGTTGGG GCATCAACAC
TTTACTCGCT TGCTGAGAGT GCTGGAGATG GTGCGTTCTT TGGGAGTGCC CGAACAGTAT
CGCACCATGC GCCTGAGTGC AGCCGGCGAG GACTCGTCGG TTCTAACCCG GCTTAAGGAG
ACCCTTGCCC GCCATATCGG TCTGATCGTG GCGCCGGATG AAGGCGATCT CCTGATTCGT
TTGCGTCGTG CGACGCAGAA GACTGGCTGG GAAGTGCTTG TGCGCCTGTC GTCGCGCCCT
CTGGCAACCC GTGAGTGGCG GGTGTGCAAC TGGCCCGGAG CGCTGAATGC CACGCTTGCT
TCAGTGATGA TGCGATTGAC ACAGCCCTCC GAAGTCGACC GTGTTCTCAA TCTTGCCTGT
GGCTCTGGGA CGCTTTTGAT TGAGCGCCTG TTCCTTGCTC CGGCACAACT GGCGATCGGT
TGCGATCTAG ATCGGGAAGC GCTGCGCTGC GCGCAGCGTA ATCTGGAAGC GGCAGGGTTC
ACTCAAGCGG TGCGACTTGA GCAGTGGGAT GCTACATTGC TGCCTCTTGA GACTGAGTCC
ATCGATATGA TATGTGCCGA TCTGCCGTTT GGCCAGTTGA TCGGTTCGCA TCGTGATAAT
GAAGCGCTCT ATCCCCGCCT GATCACTGAG GCTGCACGAG TGGCGGCATC TGGCGCCAGG
ATGTGTCTGC TGACCCACGA GGTACGCCTG ATCGAGCGCG TGTTCGAGCG ATATGCTGGT
CTCTGGACAC TCACGCATGT CGTGCGGGTG CGCACCGGCG GGATGACACC GCGCGTCTAT
CTGGCGCTGC GGACCACAAC GCCGGTGTCG TAG
|
|---|
| Protein sequence | MPPMFDIECD TLEGLEPYAL EEIRERFGRR CTSIVLRSGR IRMVYTGELQ ALLRLRSVLA
AYLVVTFDVP RPRALLGHQH FTRLLRVLEM VRSLGVPEQY RTMRLSAAGE DSSVLTRLKE
TLARHIGLIV APDEGDLLIR LRRATQKTGW EVLVRLSSRP LATREWRVCN WPGALNATLA
SVMMRLTQPS EVDRVLNLAC GSGTLLIERL FLAPAQLAIG CDLDREALRC AQRNLEAAGF
TQAVRLEQWD ATLLPLETES IDMICADLPF GQLIGSHRDN EALYPRLITE AARVAASGAR
MCLLTHEVRL IERVFERYAG LWTLTHVVRV RTGGMTPRVY LALRTTTPVS
|
|---|
| |