| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2962 |
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| Symbol | |
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| ID | 5540453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3842363 |
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| End bp | 3843025 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895082 |
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| Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
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| Protein accession | YP_001433040 |
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| Protein GI | 156742911 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00091403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000171806 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTGATA TTCAATACCT TGGACATTCA TGCTTCCGCC TCCGCGGACG CGATGGCATC
GTGCTGACCG ATCCGTATGA CCGTTCGGTG GGGCGTGATC TTGGTCGCCC CACCGCTCAT
ATCGTGACCG TCAGCCACCA CCATCCCGAC CACGACAACG TCGTCGCTGT GCGCCCGGCG
CGCGACCGCG TCACGGTGAT CGACGGTCCG GGTGAGTACG AGGTCGGCGG CATCCTGATC
ACCGGCGTGC GCACGTTCCA CGATAAGCAG AAAGGCGCCA GACTCGGGCG AAACACGGTG
TATGTCATTC ACCTCGATGA TATTGTTTTC TGTCACCTTG GCGACCTGGC GCACGAATTG
ACGGCGCAGC AACTCGAAGA GATCGGGAGC GTCGATGTGC TGTTCGTGCC GGTCGGTGGA
GGTGAAACGA TCGGACCGGC AGAGGCGGCA TCGGTGATCA GTCAGATTGA GCCACGCGTT
GTGATCCCAA TGCACTACGC AAGCGAAGGG CAATCCGCCA TGGATCTGGC GCCGCTCGAC
CGCTTCCTTC ACGAACTCGG CATCAAGGAG TATGTCCCGG AAGAACGGCT ATCGCTCAAT
GCAGGCAATC TTCCAGGAGA TGGCGAACAA ACCCGCATCG TCGTGATGCG AACCGCTGTT
TGA
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| Protein sequence | MADIQYLGHS CFRLRGRDGI VLTDPYDRSV GRDLGRPTAH IVTVSHHHPD HDNVVAVRPA
RDRVTVIDGP GEYEVGGILI TGVRTFHDKQ KGARLGRNTV YVIHLDDIVF CHLGDLAHEL
TAQQLEEIGS VDVLFVPVGG GETIGPAEAA SVISQIEPRV VIPMHYASEG QSAMDLAPLD
RFLHELGIKE YVPEERLSLN AGNLPGDGEQ TRIVVMRTAV
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