Gene Rcas_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2932 
Symbol 
ID5540422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3804665 
End bp3806212 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content61% 
IMG OID640895053 
Productaldehyde dehydrogenase 
Protein accessionYP_001433012 
Protein GI156742883 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0368912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA CCATGATTGC ACCCGGATTG GAATGGTCTT CCCTGCTGGA ACGGGCAAAG 
GCGCTCGTGC CCGAGGCGTT CGACGAAGAC GGCAATCCGC TCAACCTGAT CCATGGCGAA
TGGGGCTTTC CAGGACATCC GAAGCCGTTT CTGTCACCTG TCGATGGAAC AATGCTTGGG
AACTACCCCA TGATCGACCT CGACACGGCG CGTCACGCCG TTGCCGCCGC CGCCAGTGAG
TTCGGCGCGT GGTCCACGAC GGATCTCTCC GAACGTCAGC AGCGGGTCGA TGCCTGTGTG
CACCTGCTGC GCCAGCACCG CGAACTCATC GGTCGGTTGC TGATGTGGGA GATTGGGAAA
CCGTATGCGC AGGCGATGAC CGATGTGGAT CGCTGCATCA GCGGCGTCGA GTGGTATGTC
GAGCAGATAC CGTCGATGAT GGAGGGGCGC AAGCCGCTGG GATTGATCTC GAATATCGCC
TCGTGGAACT ATCCGCTGTC GGTGCTGGTT CACGCGATGC TGGTGCAGAT GCTGGCAGGC
AACCCGGTCA TTGCCAAAAC CCCCAGCGAC GGCGGGTTGT TCGCGCTGAC AGTTGCAATT
GCGCTGGCGC GACGCTGCGG GCTGCCGGTT TCGCTCGTGA GCGGATCCGG CGGCAGGCTT
TCCGAGGCGC TTGTGCGCGG ATCAGAGGTG GCATGCCTGG CATTCGTCGG CGGCAAAACC
AACGGACGCG ATATTGCCGC CAGCCTGTAC GACCGCGAGA AGCGCTACAT GCTCGAGATG
GAGGGGATTA ACGCCTATGG CATCTGGCAG TTCAGCCGGT GGGACGCACT GGCGACACAA
CTGCGGCGCG GCTTCGATTA TGGTAAGCAG CGCTGCACTG CCTATGTGCG CCTCGTGGTG
CAACGTCAAC TGTTCCCGCA GTTTCTCGAT ATGTACCTGC CGGTGCTCAA ATCATTGCGG
ATTGGCAATC CGACGCTTGT CGATCATCCC GACGCGCCGC CGCCCACGCT CGACTTCGGA
CCGCTGATCA ATGGGCGCAA AGTCGATGAA TTGCAGGTGT GGATCAGCGA AGCGATCGGC
GGCGGCGCTG TTAGCCTGTA TCAGGGGACG CTCCGCGATG AGGATTTCCT GCCGCATCAG
GATATTTCCG CGTACATGGC GCCCGTCGCG CTGCTGAATG TTCCCCGCAA TGCGCGCCTC
TACCACAACG AGCCGTTCGG TCCGGTCGAT ACGATTGTCG TGGTGGATAG CGTTGAGGAA
TTGATCACTG AAATGAATAT ATCCAACGGC TGTCTCGTCG CATCGGTCGC CTGCGACAAT
GAGCATCTGG CGCAACAGAT CGCCGCCGAA GTGCGCGCCT TCAAGGTCGG CATCAATACC
ATTCGCTCGC GCGGCGACCG GGACGAGGTG TTTGGCGGCA TCGGGCAAAG CTGGAAAGGG
TGTTTCGTCG GCGGCAAATA TCTGGTACAG GCGGTCACCA TCGGTCCTCC CGGCGAGCGG
TTGTACGGCA ACTTCCCCGA TTATACGCTA CTGCCGGAGG AGCGCTGA
 
Protein sequence
MKHTMIAPGL EWSSLLERAK ALVPEAFDED GNPLNLIHGE WGFPGHPKPF LSPVDGTMLG 
NYPMIDLDTA RHAVAAAASE FGAWSTTDLS ERQQRVDACV HLLRQHRELI GRLLMWEIGK
PYAQAMTDVD RCISGVEWYV EQIPSMMEGR KPLGLISNIA SWNYPLSVLV HAMLVQMLAG
NPVIAKTPSD GGLFALTVAI ALARRCGLPV SLVSGSGGRL SEALVRGSEV ACLAFVGGKT
NGRDIAASLY DREKRYMLEM EGINAYGIWQ FSRWDALATQ LRRGFDYGKQ RCTAYVRLVV
QRQLFPQFLD MYLPVLKSLR IGNPTLVDHP DAPPPTLDFG PLINGRKVDE LQVWISEAIG
GGAVSLYQGT LRDEDFLPHQ DISAYMAPVA LLNVPRNARL YHNEPFGPVD TIVVVDSVEE
LITEMNISNG CLVASVACDN EHLAQQIAAE VRAFKVGINT IRSRGDRDEV FGGIGQSWKG
CFVGGKYLVQ AVTIGPPGER LYGNFPDYTL LPEER