Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2932 |
Symbol | |
ID | 5540422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3804665 |
End bp | 3806212 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895053 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001433012 |
Protein GI | 156742883 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0368912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA CCATGATTGC ACCCGGATTG GAATGGTCTT CCCTGCTGGA ACGGGCAAAG GCGCTCGTGC CCGAGGCGTT CGACGAAGAC GGCAATCCGC TCAACCTGAT CCATGGCGAA TGGGGCTTTC CAGGACATCC GAAGCCGTTT CTGTCACCTG TCGATGGAAC AATGCTTGGG AACTACCCCA TGATCGACCT CGACACGGCG CGTCACGCCG TTGCCGCCGC CGCCAGTGAG TTCGGCGCGT GGTCCACGAC GGATCTCTCC GAACGTCAGC AGCGGGTCGA TGCCTGTGTG CACCTGCTGC GCCAGCACCG CGAACTCATC GGTCGGTTGC TGATGTGGGA GATTGGGAAA CCGTATGCGC AGGCGATGAC CGATGTGGAT CGCTGCATCA GCGGCGTCGA GTGGTATGTC GAGCAGATAC CGTCGATGAT GGAGGGGCGC AAGCCGCTGG GATTGATCTC GAATATCGCC TCGTGGAACT ATCCGCTGTC GGTGCTGGTT CACGCGATGC TGGTGCAGAT GCTGGCAGGC AACCCGGTCA TTGCCAAAAC CCCCAGCGAC GGCGGGTTGT TCGCGCTGAC AGTTGCAATT GCGCTGGCGC GACGCTGCGG GCTGCCGGTT TCGCTCGTGA GCGGATCCGG CGGCAGGCTT TCCGAGGCGC TTGTGCGCGG ATCAGAGGTG GCATGCCTGG CATTCGTCGG CGGCAAAACC AACGGACGCG ATATTGCCGC CAGCCTGTAC GACCGCGAGA AGCGCTACAT GCTCGAGATG GAGGGGATTA ACGCCTATGG CATCTGGCAG TTCAGCCGGT GGGACGCACT GGCGACACAA CTGCGGCGCG GCTTCGATTA TGGTAAGCAG CGCTGCACTG CCTATGTGCG CCTCGTGGTG CAACGTCAAC TGTTCCCGCA GTTTCTCGAT ATGTACCTGC CGGTGCTCAA ATCATTGCGG ATTGGCAATC CGACGCTTGT CGATCATCCC GACGCGCCGC CGCCCACGCT CGACTTCGGA CCGCTGATCA ATGGGCGCAA AGTCGATGAA TTGCAGGTGT GGATCAGCGA AGCGATCGGC GGCGGCGCTG TTAGCCTGTA TCAGGGGACG CTCCGCGATG AGGATTTCCT GCCGCATCAG GATATTTCCG CGTACATGGC GCCCGTCGCG CTGCTGAATG TTCCCCGCAA TGCGCGCCTC TACCACAACG AGCCGTTCGG TCCGGTCGAT ACGATTGTCG TGGTGGATAG CGTTGAGGAA TTGATCACTG AAATGAATAT ATCCAACGGC TGTCTCGTCG CATCGGTCGC CTGCGACAAT GAGCATCTGG CGCAACAGAT CGCCGCCGAA GTGCGCGCCT TCAAGGTCGG CATCAATACC ATTCGCTCGC GCGGCGACCG GGACGAGGTG TTTGGCGGCA TCGGGCAAAG CTGGAAAGGG TGTTTCGTCG GCGGCAAATA TCTGGTACAG GCGGTCACCA TCGGTCCTCC CGGCGAGCGG TTGTACGGCA ACTTCCCCGA TTATACGCTA CTGCCGGAGG AGCGCTGA
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Protein sequence | MKHTMIAPGL EWSSLLERAK ALVPEAFDED GNPLNLIHGE WGFPGHPKPF LSPVDGTMLG NYPMIDLDTA RHAVAAAASE FGAWSTTDLS ERQQRVDACV HLLRQHRELI GRLLMWEIGK PYAQAMTDVD RCISGVEWYV EQIPSMMEGR KPLGLISNIA SWNYPLSVLV HAMLVQMLAG NPVIAKTPSD GGLFALTVAI ALARRCGLPV SLVSGSGGRL SEALVRGSEV ACLAFVGGKT NGRDIAASLY DREKRYMLEM EGINAYGIWQ FSRWDALATQ LRRGFDYGKQ RCTAYVRLVV QRQLFPQFLD MYLPVLKSLR IGNPTLVDHP DAPPPTLDFG PLINGRKVDE LQVWISEAIG GGAVSLYQGT LRDEDFLPHQ DISAYMAPVA LLNVPRNARL YHNEPFGPVD TIVVVDSVEE LITEMNISNG CLVASVACDN EHLAQQIAAE VRAFKVGINT IRSRGDRDEV FGGIGQSWKG CFVGGKYLVQ AVTIGPPGER LYGNFPDYTL LPEER
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