| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2917 |
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| Symbol | |
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| ID | 5540407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3780227 |
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| End bp | 3781180 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895038 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001432997 |
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| Protein GI | 156742868 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAC ATAGGAGTAT CGATCAGAAC CACGAACATT CATTAAGTCT TAACGATCTC
CATCAGGCGC TTTTGAAGTG GTTCAGCGAG GCGGCGCGCG ATCTTCCCTG GCGCCGCACC
CGTGATCCAT ACCGCATTCT GGTGGCAGAA GTAATGCTCC AGCAAACACA GGTTGATCGG
GTGCTGCCGA AGTACGCAGC GTTCCTCGAG CGTTTTCCGA CATTGCACAC ACTGGCGGAA
GCGCCAACTG CCGAGGTCAT CCGTATGTGG GCTGGTCTGG GTTACAATCG GCGGGCCGTC
AATCTGCAAC GCGCGGCGCG CGCGATCTGC GCGCGCTACG GTGGCGTTTT CCCACGGGAT
GTCGCTACCC TGGTCACATT GCCGGGCATC GGGTCCTACA CCGCCGGCGC GGTTGCCTGC
TTCGCCTTCG AGCAGGATGT AGCGTTCATG GACACGAACA TTCGGCGCGT GATCCGGCGC
GTGTTCACCG ATCCGACGGA AACGGTCAAT GAACGCGCGC TGCTGGCGCT GGCGCGCGCG
GCGCTTCCCG TCGGTCGCAG CTGGATGTGG AACCAGGCGC TGATGGAACT GGGGTCGCTC
GTTTGCACCG CCGATGCGCC GGCATGCTGG CGCTGCCCGT TGCGCGATCA GTGCCGCGAC
TATGCTGCGC GACGCGAATC GGACGAGCGT TTTGCGTCCG CGCCGGTGCG CAAGCGCCTC
GCCGAACGTC GTGAACGCCC GTTTATCGGC TCGAATCGCT ACTTCCGTGG GCGCATCATC
GAGGCGCTCC GCATGCTTCC GTCTGGCGCG ACCTTCGCGC TGAACGATCT GGGACCGCAG
GTGCGCCCGG AGTACACACC CGACGACGAA GTATGGCTCA CAACGCTGAT TCGTGGGTTG
GAACGCGATG GACTGGTAGT GTGGACCGAG ACGGGGGTAC GGTTGCCGGA ATAG
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| Protein sequence | MTIHRSIDQN HEHSLSLNDL HQALLKWFSE AARDLPWRRT RDPYRILVAE VMLQQTQVDR
VLPKYAAFLE RFPTLHTLAE APTAEVIRMW AGLGYNRRAV NLQRAARAIC ARYGGVFPRD
VATLVTLPGI GSYTAGAVAC FAFEQDVAFM DTNIRRVIRR VFTDPTETVN ERALLALARA
ALPVGRSWMW NQALMELGSL VCTADAPACW RCPLRDQCRD YAARRESDER FASAPVRKRL
AERRERPFIG SNRYFRGRII EALRMLPSGA TFALNDLGPQ VRPEYTPDDE VWLTTLIRGL
ERDGLVVWTE TGVRLPE
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